SEED Subsystem: Molybdenum cofactor biosynthesis in Pseudomonas putida KT2440

Experiments:

Role Gene Name nitrogen source nitrate 5mM  
⨯
DNA-binding domain of ModE PP_0360 +0.6
GTP cyclohydrolase I (EC 3.5.4.16) type 1 PP_1823 N.D.
  PP_2512 +0.2
GTP cyclohydrolase II (EC 3.5.4.25) PP_0516 -0.6
  PP_0522 N.D.
  PP_3813 -0.1
Molybdate-binding domain of ModE PP_0360 +0.6
Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) PP_3828 -0.3
Molybdenum cofactor biosynthesis protein MoaA PP_1969 -0.1
  PP_2482 +0.1
  PP_4597 -2.7
Molybdenum cofactor biosynthesis protein MoaB PP_2122 -3.0
  PP_4600 +0.4
Molybdenum cofactor biosynthesis protein MoaC PP_1292 -2.9
Molybdenum cofactor biosynthesis protein MoaD PP_1293 -0.3
Molybdenum cofactor biosynthesis protein MoaE PP_1294 -2.5
Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) PP_3830 -0.1
Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) PP_3829 -0.0
Molybdenum transport system protein ModD No genes
Molybdopterin binding domain MoeA-like No genes
Molybdopterin biosynthesis Mog protein, molybdochelatase No genes
Molybdopterin biosynthesis enzyme No genes
Molybdopterin biosynthesis protein MoeA PP_2123 -2.0
Molybdopterin biosynthesis protein MoeB PP_0735 -1.7
Molybdopterin-guanine dinucleotide biosynthesis protein MobA PP_3457 N.D.
Molybdopterin-guanine dinucleotide biosynthesis protein MobB No genes
Periplasmic molybdate-binding domain No genes
Protein co-occuring with molybdenum cofactor biosynthesis protein B No genes

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