SEED Subsystem: Protocatechuate branch of beta-ketoadipate pathway in Pseudomonas fluorescens FW300-N2E2

Experiments:

Role Gene Name Carnitine Hydrochloride (C)  
⨯
3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) Pf6N2E2_2831 -0.1
3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6) No genes
3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) No genes
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase No genes
4-carboxymuconolactone decarboxylase (EC 4.1.1.44) Pf6N2E2_2829 -0.3
  Pf6N2E2_3293 +0.5
Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) Pf6N2E2_2401 +0.2
  Pf6N2E2_2683 -0.0
  Pf6N2E2_2830 -0.1
Beta-ketoadipyl CoA thiolase (EC 2.3.1.-) Pf6N2E2_2835 +0.1
Pca regulon regulatory protein PcaR Pf6N2E2_2839 +0.2
PhaK-like protein Pf6N2E2_2828 +0.0
  Pf6N2E2_490 -0.1
  Pf6N2E2_867 -0.2
Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) Pf6N2E2_2833 -0.3
Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3) Pf6N2E2_2834 -0.2
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) Pf6N2E2_2111 -2.0
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) Pf6N2E2_2112 -2.0
dicarboxylic acid transporter PcaT Pf6N2E2_2832 -0.0

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Or view this subsystem at the SEED (slow)