SEED Subsystem: Pyridoxin (Vitamin B6) Biosynthesis in Klebsiella michiganensis M5al

Experiments:

Role Gene Name Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL  
⨯
1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) BWI76_RS06380 N.D.
4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) BWI76_RS04525 -1.5
  BWI76_RS15230 +0.4
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) BWI76_RS07870 -0.2
  BWI76_RS07875 +0.2
  BWI76_RS14900 +0.3
  BWI76_RS21910 +0.1
  BWI76_RS23920 -3.3
  BWI76_RS26540 -0.2
  BWI76_RS27925 +0.0
D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) BWI76_RS23985 -2.2
Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290) BWI76_RS20390 -3.6
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) BWI76_RS11505 N.D.
  BWI76_RS12975 +0.4
  BWI76_RS13215 +0.5
Phosphoserine aminotransferase (EC 2.6.1.52) BWI76_RS09755 -3.0
Predicted transcriptional regulator of pyridoxine metabolism BWI76_RS20670 -0.4
Pyridoxal kinase (EC 2.7.1.35) BWI76_RS16400 +0.4
  BWI76_RS20665 -0.2
Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) BWI76_RS16410 N.D.
Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) BWI76_RS21305 N.D.
Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) No genes
Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) No genes
Substrate-specific component PdxT of predicted pyridoxine ECF transporter No genes

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