MetaCyc Pathway: photorespiration I in Variovorax sp. OAS795

Reactions and Genes	D-Lactate (C)
D-ribulose-1,5-bisphosphate + dioxygen→2-phosphoglycolate + 3-phospho-D-glycerate + 2 H+
ABID97_RS12845	-0.2
Phosphoglycolate phosphatase: 2-phosphoglycolate + H2O→glycolate + phosphate (EC 3.1.3.18)
ABID97_RS05240	-0.0
ABID97_RS07650	+0.2
ABID97_RS08255	+0.3
ABID97_RS09545	-0.1
ABID97_RS12870	N.D.
ABID97_RS13695	+0.1
(S)-2-hydroxy-acid oxidase: glycolate + dioxygen→glyoxylate + hydrogen peroxide (EC 1.1.3.15)
ABID97_RS03650	-6.8
ABID97_RS15850	+0.3
Glycine transaminase (in reverse): glyoxylate + L-glutamate→glycine + 2-oxoglutarate (EC 2.6.1.4)
No genes
Serine--glyoxylate transaminase: glyoxylate + L-serine→glycine + 3-hydroxypyruvate (EC 2.6.1.45)
ABID97_RS15840	+0.8
glycine + NAD+ + a tetrahydrofolate→a 5,10-methylenetetrahydrofolate + ammonium + CO2 + NADH (EC 1.4.1.27)
No genes
Glycerate dehydrogenase (in reverse): 3-hydroxypyruvate + NADH + H+→D-glycerate + NAD+ (EC 1.1.1.29)
No genes
Glycerate kinase: D-glycerate + ATP→3-phospho-D-glycerate + ADP + H+ (EC 2.7.1.31)
ABID97_RS22180	-0.2
ABID97_RS27670	+0.3
Glycine hydroxymethyltransferase (in reverse): glycine + a 5,10-methylenetetrahydrofolate + H2O→L-serine + a tetrahydrofolate (EC 2.1.2.1)
ABID97_RS17890	N.D.

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information