MetaCyc Pathway: Fe(II) oxidation in Pseudomonas fluorescens FW300-N1B4

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Reactions and Genes D-Lactate (C)
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Fe2+[out] + an oxidized rusticyanin[in]→a reduced rusticyanin[in] + Fe3+[out] (EC 1.16.9.1)
No genes
a reduced rusticyanin[out] + an oxidized Cyc1 cytochrome[out]→a reduced Cyc1 cytochrome[out] + an oxidized rusticyanin[out]
No genes
a reduced rusticyanin[out] + an oxidized CycA1 cytochrome[out]→a reduced CycA1 cytochrome[out] + an oxidized rusticyanin[out]
No genes
4 a reduced c-type cytochrome[out] + dioxygen[in] + 8 H+[in]→2 H2O[in] + 4 an oxidized c-type cytochrome[out] + 4 H+[out] (EC 7.1.1.9)
Pf1N1B4_1853 -0.0
Pf1N1B4_1854 -0.1
Pf1N1B4_1857 +0.1
Pf1N1B4_3287 +0.2
Pf1N1B4_3288 -0.1
Pf1N1B4_3289 -0.1
Pf1N1B4_3290 +0.4
Pf1N1B4_3876 -1.8
Pf1N1B4_3877 N.D.
Pf1N1B4_3878 -2.0
Pf1N1B4_3879 -1.7
Pf1N1B4_3881 +0.2
Pf1N1B4_3882 N.D.
Pf1N1B4_3883 -0.0
Pf1N1B4_3884 +0.1
Pf1N1B4_4654 -0.1
a ubiquinol + 2 an oxidized CycA1 cytochrome[out] + 2 H+[in]→2 a reduced CycA1 cytochrome[out] + 4 H+[out] + a ubiquinone (EC 7.1.1.8)
Pf1N1B4_961 -1.7
Pf1N1B4_962 -1.7
a ubiquinol + NAD+[in] + 4 H+[out]→NADH[in] + 5 H+[in] + a ubiquinone (EC 7.1.1.2)
Pf1N1B4_2826 +0.1
Pf1N1B4_4028 -0.4
Pf1N1B4_4029 -0.4
Pf1N1B4_4030 -0.5
Pf1N1B4_4031 N.D.
Pf1N1B4_4032 N.D.
Pf1N1B4_4033 N.D.
Pf1N1B4_4034 N.D.
Pf1N1B4_4035 -0.6
Pf1N1B4_4037 N.D.
Pf1N1B4_4038 +0.0
Pf1N1B4_4039 -0.2
Pf1N1B4_4040 -0.7
Pf1N1B4_4041 -0.5
Pf1N1B4_4403 +0.5
Pf1N1B4_5707 +0.1

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information