| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Mycobacterium tuberculosis H37Rv | Rv0890c | | Probable transcriptional regulatory protein (probably LuxR-family) | insig. | 100 | 100 |
| | Mycobacterium tuberculosis H37Rv | Rv1358 | | Probable transcriptional regulatory protein | insig. | 65 | 100 |
| | Mycobacterium tuberculosis H37Rv | Rv2488c | | Probable transcriptional regulatory protein (LuxR-family) | insig. | 55 | 100 |
| | Mycobacterium tuberculosis H37Rv | Rv0386 | | Probable transcriptional regulatory protein (probably LuxR/UhpA-family) | insig. | 57 | 100 |
| | Mycobacterium tuberculosis H37Rv | Rv0894 | | Possible transcriptional regulatory protein (possibly LuxR-family) | no data | 54 | 36 |
| | Rhizobium sp. OAE497 | ABIE40_RS13985 | | adenylate/guanylate cyclase domain-containing protein | insig. | 40 | 44 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_252 | | Disease resistance protein / Tetratricopeptide repeat-containing protein | insig. | 39 | 45 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_22245 | | transcriptional regulator | insig. | 38 | 43 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_21955 | | transcriptional regulator | insig. | 38 | 44 |
| | Pseudomonas orientalis W4I3 | QF045_RS13865 | | winged helix-turn-helix domain-containing protein | insig. | 38 | 43 |
| | Paraburkholderia graminis OAS925 | ABIE53_002241 | | putative ATPase/DNA-binding winged helix-turn-helix (wHTH) protein | insig. | 40 | 44 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5918 | | Disease resistance protein / Tetratricopeptide repeat-containing protein | insig. | 38 | 43 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01093 | | transcriptional regulator, winged helix family | insig. | 34 | 56 |
| | Pseudomonas sp. RS175 | PFR28_02650 | | hypothetical protein | insig. | 37 | 44 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37415 | | winged helix-turn-helix domain-containing protein | insig. | 39 | 40 |
| | Pseudomonas simiae WCS417 | PS417_16115 | | transcriptional regulator | insig. | 36 | 47 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02633 | | hypothetical protein | cofit | 37 | 43 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS30355 | | transcriptional regulator | insig. | 40 | 40 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS18085 | | helix-turn-helix transcriptional regulator | insig. | 35 | 51 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS18085 | | helix-turn-helix transcriptional regulator | insig. | 35 | 51 |
| | Pseudomonas sp. DMC3 | GFF933 | | hypothetical protein | cofit | 37 | 43 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37405 | | winged helix-turn-helix domain-containing protein | insig. | 37 | 42 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37450 | | winged helix-turn-helix domain-containing protein | insig. | 39 | 40 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3869 | | Disease resistance protein / Tetratricopeptide repeat-containing protein | insig. | 41 | 35 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3868 | | Disease resistance protein / Tetratricopeptide repeat-containing protein | insig. | 35 | 43 |
| | Pseudomonas simiae WCS417 | PS417_10355 | | transcriptional regulator | insig. | 36 | 40 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5919 | | Signal transduction response regulator / Tetratricopeptide repeat-containing protein | insig. | 38 | 36 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01106 | | Predicted ATPase | no data | 38 | 42 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS30420 | | transcriptional regulator | insig. | 38 | 42 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_22240 | | transcriptional regulator | insig. | 40 | 34 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS38880 | | winged helix-turn-helix domain-containing protein | insig. | 35 | 44 |
| | Paraburkholderia graminis OAS925 | ABIE53_002254 | | putative ATPase/DNA-binding winged helix-turn-helix (wHTH) protein | insig. | 37 | 42 |
| | Pseudomonas segetis P6 | MPMX49_01858 | | hypothetical protein | insig. | 40 | 34 |
| | Lysobacter sp. OAE881 | ABIE51_RS10330 | | winged helix-turn-helix domain-containing protein | insig. | 36 | 40 |
| | Pseudomonas sp. DMC3 | GFF932 | | hypothetical protein | cofit | 35 | 36 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03403 | | Predicted ATPase | insig. | 38 | 35 |
| | Pseudomonas simiae WCS417 | PS417_16120 | | transcriptional regulator | insig. | 37 | 34 |
| | Pseudomonas sp. RS175 | PFR28_02651 | | hypothetical protein | insig. | 37 | 36 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_21950 | | transcriptional regulator | insig. | 38 | 36 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02632 | | hypothetical protein | insig. | 36 | 35 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_251 | | transcriptional regulator | insig. | 35 | 36 |
| | Pseudomonas orientalis W4I3 | QF045_RS13860 | | winged helix-turn-helix domain-containing protein | insig. | 33 | 35 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS18090 | | AAA family ATPase | insig. | 36 | 34 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS18090 | | AAA family ATPase | insig. | 36 | 34 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1253 | | transcriptional regulator | insig. | 36 | 35 |
| | Paraburkholderia graminis OAS925 | ABIE53_004787 | | putative ATPase/DNA-binding winged helix-turn-helix (wHTH) protein | insig. | 34 | 34 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS33130 | | transcriptional regulator | insig. | 31 | 34 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00036 | | DNA-binding winged helix-turn-helix (wHTH) domain-containing protein | insig. | 28 | 35 |
| | Variovorax sp. SCN45 | GFF3032 | | Two-component transcriptional response regulator, LuxR family | insig. | 41 | 8 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01738 | | PAS domain S-box-containing protein | insig. | 50 | 7 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1673 | | Nitrogen regulation protein NR(I) | insig. | 47 | 8 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2675 | | DNA-binding response regulator, LuxR family (TIGR) | insig. | 46 | 7 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3500 | | Sensory box transcriptional regulator, LuxR family | insig. | 48 | 7 |
| | Pseudomonas simiae WCS417 | PS417_10605 | | LuxR family transcriptional regulator | insig. | 44 | 8 |
| | Dickeya dianthicola 67-19 | HGI48_RS12040 | | two-component system response regulator NarL | insig. | 35 | 12 |
| | Dickeya dianthicola ME23 | DZA65_RS12490 | | two-component system response regulator NarL | cofit | 35 | 12 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02217 | | HTH-type transcriptional regulator MalT | cofit | 45 | 7 |
| | Pseudomonas orientalis W4I3 | QF045_RS12575 | | helix-turn-helix transcriptional regulator | insig. | 45 | 7 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4524 | | Sensory box transcriptional regulator, LuxR family | no data | 35 | 12 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS10665 | | helix-turn-helix transcriptional regulator | insig. | 44 | 8 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS10665 | | helix-turn-helix transcriptional regulator | sig. | 44 | 8 |
| | Dickeya dadantii 3937 | DDA3937_RS11950 | | two-component system response regulator NarL | sig. | 40 | 7 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS36380 | | LuxR family transcriptional regulator | insig. | 33 | 23 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS20525 | | LuxR family transcriptional regulator | cofit | 33 | 23 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4674 | | Nitrogen regulation protein NR(I) | no data | 47 | 6 |
| | Mycobacterium tuberculosis H37Rv | Rv3133c | | Two component transcriptional regulatory protein DevR (probably LuxR/UhpA-family) | sig. | 43 | 7 |
| | Variovorax sp. SCN45 | GFF1896 | | Two-component transcriptional response regulator, LuxR family | insig. | 55 | 6 |
| | Pseudomonas sp. DMC3 | GFF1689 | | HTH-type transcriptional regulator MalT | cofit | 42 | 7 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_23110 | | LuxR family transcriptional regulator | insig. | 42 | 7 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_501 | | Sensory box transcriptional regulator, LuxR family | insig. | 42 | 7 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS04725 | | response regulator transcription factor | strong | 45 | 7 |
| | Variovorax sp. SCN45 | GFF6647 | | Two-component transcriptional response regulator, LuxR family | insig. | 40 | 10 |
| | Variovorax sp. SCN45 | GFF5975 | | Two-component transcriptional response regulator, LuxR family | insig. | 37 | 12 |
| | Lysobacter sp. OAE881 | ABIE51_RS10320 | | response regulator transcription factor | insig. | 51 | 7 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_25530 | | LuxR family transcriptional regulator | insig. | 46 | 6 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3241 | | Transcriptional regulator, LuxR family | strong | 41 | 7 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS11330 | | response regulator transcription factor | insig. | 38 | 9 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS11600 | | response regulator transcription factor | insig. | 38 | 9 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_06895 | | LuxR family transcriptional regulator | insig. | 41 | 7 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4489 | | Nitrate/nitrite response regulator protein | no data | 50 | 6 |
| | Pseudomonas sp. RS175 | PFR28_02434 | | HTH-type transcriptional regulator MalT | insig. | 41 | 7 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1320 | | Putative response regulator | insig. | 46 | 6 |
| | Pseudomonas sp. SVBP6 | COO64_RS03415 | | LuxR C-terminal-related transcriptional regulator | insig. | 43 | 7 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS06830 | | DNA-binding response regulator | insig. | 43 | 7 |
| | Rhizobium sp. OAE497 | ABIE40_RS23610 | | response regulator transcription factor | insig. | 42 | 7 |
| | Variovorax sp. OAS795 | ABID97_RS01990 | | response regulator | no data | 48 | 7 |
| | Serratia liquefaciens MT49 | IAI46_12590 | | helix-turn-helix transcriptional regulator | insig. | 44 | 7 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS16725 | | two-component system response regulator NarL | insig. | 36 | 8 |
| | Variovorax sp. OAS795 | ABID97_RS16350 | | response regulator | no data | 47 | 6 |
| | Variovorax sp. OAS795 | ABID97_RS09120 | | response regulator transcription factor | strong | 44 | 7 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS13200 | | transcriptional regulator | insig. | 50 | 5 |
| | Pseudomonas stutzeri RCH2 | Psest_3491 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | no data | 45 | 6 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5632 | | Regulatory protein, LuxR:Tetratricopeptide TPR_4 | no data | 45 | 7 |
| | Pseudomonas segetis P6 | MPMX49_03701 | | HTH-type transcriptional regulator MalT | insig. | 44 | 7 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2442 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | cofit | 44 | 6 |
| | Enterobacter sp. TBS_079 | MPMX20_01114 | | Putative transcriptional regulator | strong | 44 | 6 |
| | Variovorax sp. SCN45 | GFF638 | | Two-component transcriptional response regulator, LuxR family | insig. | 38 | 9 |
| | Pantoea sp. MT58 | IAI47_04245 | | two-component system response regulator NarL | sig. | 32 | 11 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_2109 | | Nitrate/nitrite response regulator protein | insig. | 50 | 6 |
| | Bifidobacterium breve UCC2003 | BBR_RS14610 | | DNA-binding response regulator | strong | 48 | 6 |