Homologs of Psyr_3385 from Pseudomonas syringae pv. syringae B728a

TPR repeat protein
SEED: Cytochrome c heme lyase subunit CcmH
KEGG: cytochrome c-type biogenesis protein CcmH

86 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas syringae pv. syringae B728a Psyr_3385 TPR repeat protein no data 100 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3385 TPR repeat protein no data 100 100
o Pseudomonas fluorescens FW300-N2E3 AO353_18890 cytochrome C strong 72 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4308 Cytochrome c heme lyase subunit CcmH sig. 72 100
o Pseudomonas simiae WCS417 PS417_08730 cytochrome C insig. 71 100
o Pseudomonas fluorescens SBW25 PFLU_RS08685 c-type cytochrome biogenesis protein CcmI insig. 71 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS08685 c-type cytochrome biogenesis protein CcmI strong 71 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01878 hypothetical protein cofit 71 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3647 Cytochrome c heme lyase subunit CcmH cofit 72 100
o Pseudomonas fluorescens FW300-N2C3 AO356_03620 cytochrome C strong 71 100
o Pseudomonas sp. DMC3 GFF2493 hypothetical protein cofit 71 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2552 Cytochrome c heme lyase subunit CcmH strong 71 100
o Pseudomonas sp. RS175 PFR28_00873 hypothetical protein strong 71 100
o Pseudomonas sp. SVBP6 COO64_RS25730 ccmI c-type cytochrome biogenesis protein CcmI sig. 68 100
o Pseudomonas sp. BP01 JOY50_RS00465 ccmI c-type cytochrome biogenesis protein CcmI insig. 69 100
o Pseudomonas putida KT2440 PP_4320 cytochrome c-type biogenesis protein strong 68 100
o Pseudomonas aeruginosa PA14 IKLFDK_07055 Cytochrome c-type biogenesis protein CycH strong 63 100
o Pseudomonas segetis P6 MPMX49_03104 hypothetical protein strong 58 99
o Pseudomonas stutzeri RCH2 Psest_1762 cytochrome c-type biogenesis protein CcmI insig. 57 96
o Pseudomonas sp. S08-1 OH686_02620 Cytochrome c heme lyase subunit CcmH strong 58 94
o Shewanella oneidensis MR-1 SO0265 conserved hypothetical protein (NCBI ptt file) sig. 31 95
o Shewanella sp. ANA-3 Shewana3_0233 TPR repeat-containing protein (RefSeq) sig. 31 97
o Shewanella amazonensis SB2B Sama_0247 cytochrome c-type biogenesis protein CcmH (RefSeq) cofit 31 94
o Shewanella loihica PV-4 Shew_0192 TPR repeat-containing protein (RefSeq) sig. 30 99
o Marinobacter adhaerens HP15 HP15_2277 TPR repeat protein strong 32 88
o Rahnella sp. WP5 EX31_RS19730 c-type cytochrome biogenesis protein CcmI insig. 28 94
o Pantoea sp. MT58 IAI47_06105 c-type cytochrome biogenesis protein CcmI insig. 29 95
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS00060 c-type cytochrome biogenesis protein CcmI cofit 29 95
  Rhodanobacter sp. FW510-T8 OKGIIK_08600 Cytochrome c heme lyase subunit CcmH no data 34 75
o Erwinia amylovora T8 OLJFJH_11115 c-type cytochrome biogenesis protein CcmI insig. 27 99
o Serratia liquefaciens MT49 IAI46_18070 c-type cytochrome biogenesis protein CcmI insig. 25 94
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12745 cytochrome C biogenesis protein CcmI no data 31 77
  Rhodanobacter denitrificans MT42 LRK55_RS15800 tetratricopeptide repeat protein no data 32 75
o Vibrio cholerae E7946 ATCC 55056 CSW01_10250 c-type cytochrome biogenesis protein CcmI cofit 27 95
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16050 tetratricopeptide repeat protein insig. 32 72
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS06460 tetratricopeptide repeat protein insig. 31 70
  Lysobacter sp. OAE881 ABIE51_RS08685 tetratricopeptide repeat protein cofit 31 67
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2339.1 Cytochrome c heme lyase subunit CcmH insig. 31 65
  Dechlorosoma suillum PS Dsui_1175 cytochrome c-type biogenesis protein CcmI strong 31 65
  Sinorhizobium meliloti 1021 SMc02361 cytochrome C-type biogenesis transmembrane protein sig. 27 63
  Shewanella oneidensis MR-1 SO0482 nrfG formate-dependent nitrite reductase, nrfG protein (NCBI ptt file) insig. 34 35
  Kangiella aquimarina DSM 16071 B158DRAFT_1331 Cytochrome c biogenesis factor strong 27 65
  Pectobacterium carotovorum WPP14 HER17_RS09070 c-type cytochrome biogenesis protein CcmI insig. 27 62
  Alteromonas macleodii MIT1002 MIT1002_00968 Cytochrome c-type biogenesis protein CcmH precursor strong 23 94
  Rhodopseudomonas palustris CGA009 TX73_009890 c-type cytochrome biogenesis protein CcmI sig. 27 75
  Escherichia coli BL21 ECD_03948 heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfG insig. 29 39
  Escherichia coli ECOR27 NOLOHH_05040 nrfG heme lyase NrfEFG subunit NrfG insig. 29 39
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03964 Formate-dependent nitrite reductase complex subunit NrfG cofit 29 39
  Escherichia coli BW25113 b4076 nrfG heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfG (NCBI) sig. 29 37
  Escherichia coli ECRC62 BNILDI_06485 nrfG heme lyase NrfEFG subunit NrfG insig. 29 39
  Azospirillum brasilense Sp245 AZOBR_RS00755 cytochrome C biogenesis protein no data 28 63
  Escherichia coli ECOR38 HEPCGN_11415 nrfG heme lyase NrfEFG subunit NrfG insig. 29 39
  Escherichia coli ECRC100 OKFHMN_12790 nrfG heme lyase NrfEFG subunit NrfG cofit 30 36
  Escherichia coli ECRC101 MCAODC_03300 nrfG heme lyase NrfEFG subunit NrfG insig. 30 36
  Escherichia coli ECRC102 NIAGMN_10635 nrfG heme lyase NrfEFG subunit NrfG cofit 30 36
  Escherichia coli ECRC98 JDDGAC_16425 nrfG heme lyase NrfEFG subunit NrfG insig. 30 36
  Escherichia coli ECRC99 KEDOAH_15360 nrfG heme lyase NrfEFG subunit NrfG no data 30 36
  Escherichia fergusonii Becca EFB2_04513 Formate-dependent nitrite reductase complex subunit NrfG insig. 29 39
  Escherichia coli Nissle 1917 ECOLIN_RS23585 heme lyase NrfEFG subunit NrfG insig. 29 39
  Azospirillum sp. SherDot2 MPMX19_02536 hypothetical protein insig. 30 63
  Shewanella sp. ANA-3 Shewana3_0492 formate-dependent nitrite reductase, NrfG protein (RefSeq) insig. 36 35
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1458 Cytochrome c-type heme lyase subunit nrfG, nitrite reductase complex assembly insig. 31 32
  Dinoroseobacter shibae DFL-12 Dshi_3778 TPR repeat-containing protein (RefSeq) no data 25 60
  Dinoroseobacter shibae DFL-12 Dshi_4054 TPR repeat-containing protein (RefSeq) no data 25 60
  Xanthobacter sp. DMC5 GFF1777 hypothetical protein no data 28 67
  Dinoroseobacter shibae DFL-12 Dshi_3408 TPR repeat-containing protein (RefSeq) insig. 24 54
  Pectobacterium carotovorum WPP14 HER17_RS09025 heme lyase NrfEFG subunit NrfG insig. 32 28
  Shewanella loihica PV-4 Shew_0351 TPR repeat-containing protein (RefSeq) insig. 29 31
  Magnetospirillum magneticum AMB-1 AMB_RS21265 c-type cytochrome biogenesis protein CcmI strong 28 59
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10835 c-type cytochrome biogenesis protein CcmI strong 29 54
  Agrobacterium fabrum C58 Atu0973 cycH protein sig. 26 49
  Escherichia coli ECRC100 OKFHMN_23315 ccmH cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH insig. 27 33
  Escherichia coli ECRC101 MCAODC_14365 ccmH cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH insig. 27 33
  Escherichia coli ECRC102 NIAGMN_21080 ccmH cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH insig. 27 33
  Escherichia coli ECRC98 JDDGAC_27275 ccmH cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH insig. 27 33
  Escherichia coli ECRC99 KEDOAH_04870 ccmH cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH no data 27 33
  Escherichia coli BL21 ECD_02121 heme lyase, CcmH subunit insig. 27 33
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01517 Cytochrome c-type biogenesis protein CcmH insig. 27 33
  Escherichia coli ECRC62 BNILDI_13810 ccmH cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH insig. 27 33
  Escherichia fergusonii Becca EFB2_01662 Cytochrome c-type biogenesis protein CcmH insig. 27 33
  Escherichia coli ECOR27 NOLOHH_14890 ccmH cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH insig. 27 33
  Escherichia coli BW25113 b2194 ccmH heme lyase, CcmH subunit (NCBI) insig. 27 33
  Escherichia coli ECOR38 HEPCGN_22580 ccmH cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH insig. 27 33
  Escherichia coli Nissle 1917 ECOLIN_RS12825 cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH insig. 27 33
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF280 Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH sig. 26 35
  Azospirillum brasilense Sp245 AZOBR_RS00755 cytochrome C biogenesis protein no data 30 29