| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Azospirillum sp. SherDot2 | MPMX19_06789 | | Octopine catabolism/uptake operon regulatory protein OccR | insig. | 100 | 100 |
| o | Bosea sp. OAE506 | ABIE41_RS12185 | | LysR family transcriptional regulator | insig. | 57 | 98 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS16410 | | LysR family transcriptional regulator | insig. | 32 | 92 |
| o | Variovorax sp. OAS795 | ABID97_RS09190 | | LysR substrate-binding domain-containing protein | insig. | 36 | 97 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS30210 | | LysR family transcriptional regulator | insig. | 31 | 93 |
| | Bosea sp. OAE506 | ABIE41_RS18395 | | LysR family transcriptional regulator | insig. | 33 | 95 |
| o | Acidovorax sp. GW101-3H11 | Ac3H11_1645 | | Chromosome initiation inhibitor | insig. | 34 | 99 |
| o | Variovorax sp. SCN45 | GFF4008 | | Transcriptional regulator, LysR family | insig. | 35 | 97 |
| o | Sphingobium sp. HT1-2 | GFF2761 | | putative transcriptional regulatory protein, LysR family | cofit | 37 | 82 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS08045 | | LysR substrate-binding domain-containing protein | insig. | 29 | 93 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1636 | | LysR-family transcriptional regulator | insig. | 35 | 91 |
| | Bosea sp. OAE506 | ABIE41_RS16445 | | LysR substrate-binding domain-containing protein | insig. | 34 | 96 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4034 | | Chromosome initiation inhibitor | insig. | 33 | 97 |
| | Paraburkholderia graminis OAS925 | ABIE53_001883 | | DNA-binding transcriptional LysR family regulator | insig. | 32 | 93 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1093 | | Transcriptional regulatory protein | insig. | 32 | 99 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS00500 | | LysR substrate-binding domain-containing protein | insig. | 32 | 98 |
| | Bosea sp. OAE506 | ABIE41_RS01485 | | LysR substrate-binding domain-containing protein | insig. | 33 | 96 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03858 | | DNA-binding transcriptional regulator, LysR family | insig. | 31 | 97 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_26100 | | LysR family transcriptional regulator | insig. | 31 | 99 |
| | Serratia liquefaciens MT49 | IAI46_10685 | | LysR family transcriptional regulator | insig. | 28 | 93 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS04890 | | LysR family transcriptional regulator | insig. | 35 | 81 |
| | Ralstonia solanacearum UW163 | UW163_RS08735 | | LysR family transcriptional regulator | insig. | 35 | 81 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_28950 | | LysR family transcriptional regulator | insig. | 33 | 90 |
| o | Pseudomonas stutzeri RCH2 | Psest_2120 | | Transcriptional regulator | insig. | 33 | 100 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS12390 | | LysR family transcriptional regulator | insig. | 35 | 81 |
| | Ralstonia solanacearum GMI1000 | RS_RS12520 | | LysR family transcriptional regulator | insig. | 35 | 81 |
| o | Pseudomonas sp. BP01 | JOY50_RS07300 | | LysR family transcriptional regulator | insig. | 28 | 97 |
| | Azospirillum brasilense Sp245 | AZOBR_RS27080 | | transcriptional regulator | insig. | 33 | 92 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5007 | | LysR-family transcriptional regulator | no data | 31 | 93 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS14425 | | LysR substrate-binding domain-containing protein | insig. | 31 | 99 |
| | Bosea sp. OAE506 | ABIE41_RS20010 | | LysR family transcriptional regulator | insig. | 30 | 90 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS04380 | | LysR family transcriptional regulator | insig. | 32 | 88 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS38835 | | LysR substrate-binding domain-containing protein | insig. | 30 | 96 |
| | Azospirillum sp. SherDot2 | MPMX19_02982 | | Octopine catabolism/uptake operon regulatory protein OccR | insig. | 33 | 93 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS33285 | | LysR substrate-binding domain-containing protein | insig. | 31 | 92 |
| | Bosea sp. OAE506 | ABIE41_RS01585 | | LysR substrate-binding domain-containing protein | insig. | 32 | 88 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS20485 | | LysR family transcriptional regulator | no data | 31 | 90 |
| | Paraburkholderia graminis OAS925 | ABIE53_006260 | | DNA-binding transcriptional LysR family regulator | sig. | 31 | 92 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS29625 | | LysR family transcriptional regulator | sig. | 30 | 90 |
| | Paraburkholderia graminis OAS925 | ABIE53_001381 | | DNA-binding transcriptional LysR family regulator | insig. | 29 | 89 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_744 | | Transcriptional activator protein LysR | insig. | 33 | 81 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS32370 | | LysR family transcriptional regulator | insig. | 28 | 97 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01258 | | transcriptional regulator, LysR family | insig. | 30 | 92 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5021 | | LysR-family transcriptional regulator | insig. | 33 | 69 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS09410 | | LysR family transcriptional regulator | sig. | 30 | 92 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3120 | | LysR-family transcriptional regulator | insig. | 30 | 86 |
| | Variovorax sp. SCN45 | GFF1534 | | Transcriptional regulator, LysR family | insig. | 33 | 74 |
| o | Pseudomonas sp. RS175 | PFR28_04212 | | hypothetical protein | insig. | 31 | 99 |
| | Variovorax sp. OAS795 | ABID97_RS25700 | | LysR substrate-binding domain-containing protein | insig. | 33 | 99 |
| | Sphingobium sp. HT1-2 | GFF4686 | | Transcriptional regulator, LysR family | cofit | 28 | 92 |
| | Variovorax sp. SCN45 | GFF5781 | | Transcriptional regulator, LysR family | insig. | 32 | 89 |
| | Sinorhizobium meliloti 1021 | SM_b20582 | | LysR family transcriptional regulator | insig. | 29 | 81 |
| | Agrobacterium fabrum C58 | Atu6029 | | transcriptional regulator, LysR family for nopaline metabolism | sig. | 27 | 86 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS17115 | | LysR family transcriptional regulator | cofit | 29 | 93 |
| | Caulobacter crescentus NA1000 | CCNA_01693 | | LysR-family transcriptional regulator | strong | 32 | 93 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_01693 | | LysR-family transcriptional regulator | cofit | 32 | 93 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS35085 | | transcriptional regulator | insig. | 29 | 91 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS02340 | | LysR family transcriptional regulator | insig. | 29 | 99 |
| | Ralstonia solanacearum UW163 | UW163_RS11385 | | LysR family transcriptional regulator | insig. | 29 | 99 |
| | Dickeya dadantii 3937 | DDA3937_RS20640 | | LysR family transcriptional regulator | sig. | 34 | 57 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF17 | | LysR family transcriptional regulator YfeR | insig. | 29 | 98 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5776 | | putative transcriptional regulator, LysR family | insig. | 29 | 99 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_28100 | | LysR family transcriptional regulator | insig. | 32 | 97 |
| | Dickeya dianthicola 67-19 | HGI48_RS00545 | | LysR family transcriptional regulator | insig. | 30 | 81 |
| | Erwinia amylovora T8 | OLJFJH_08875 | | LysR family transcriptional regulator | strong | 30 | 92 |
| | Klebsiella michiganensis M5al | BWI76_RS04365 | | LysR family transcriptional regulator | insig. | 27 | 92 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2372 | | Transcriptional regulator, LysR family | insig. | 32 | 92 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_05444 | | hypothetical protein | cofit | 30 | 81 |
| | Pantoea sp. MT58 | IAI47_03855 | | LysR family transcriptional regulator | strong | 29 | 93 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_08070 | | LysR family transcriptional regulator | insig. | 31 | 92 |
| | Dickeya dianthicola ME23 | DZA65_RS00580 | | LysR family transcriptional regulator | insig. | 30 | 81 |
| o | Pseudomonas segetis P6 | MPMX49_01923 | | hypothetical protein | insig. | 32 | 90 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2536 | | transcriptional regulator, LysR family | insig. | 27 | 99 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2536 | | transcriptional regulator, LysR family | insig. | 27 | 99 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3334 | | Transcriptional regulators, LysR family | insig. | 30 | 91 |
| o | Pseudomonas sp. SVBP6 | COO64_RS25785 | | LysR family transcriptional regulator | insig. | 30 | 90 |
| | Rahnella sp. WP5 | EX31_RS20145 | | LysR family transcriptional regulator | insig. | 28 | 99 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2706 | | Transcriptional regulatory protein | insig. | 28 | 93 |
| o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3352 | | Transcriptional regulator | insig. | 28 | 92 |
| | Pseudomonas simiae WCS417 | PS417_26565 | | LysR family transcriptional regulator | insig. | 30 | 92 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS18490 | | LysR family transcriptional regulator | insig. | 25 | 98 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1039 | | Transcriptional regulator, LysR family | insig. | 31 | 99 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS02865 | | transcription regulator protein | insig. | 29 | 81 |
| | Pantoea sp. MT58 | IAI47_19880 | | LysR family transcriptional regulator | sig. | 28 | 92 |
| | Enterobacter sp. TBS_079 | MPMX20_03302 | | HTH-type transcriptional regulator CynR | insig. | 28 | 99 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS34480 | | LysR family transcriptional regulator | no data | 27 | 90 |
| | Pseudomonas putida KT2440 | PP_2078 | | transcriptional activator protein LysR | insig. | 30 | 99 |
| | Azospirillum sp. SherDot2 | MPMX19_02886 | | HTH-type transcriptional regulator CynR | insig. | 29 | 86 |
| | Variovorax sp. SCN45 | GFF6064 | | Transcriptional regulator YfeR, LysR family | no data | 29 | 92 |
| | Ralstonia solanacearum GMI1000 | RS_RS09495 | | LysR family transcriptional regulator | insig. | 30 | 99 |
| | Rhodospirillum rubrum S1H | Rru_A1466 | | Transcriptional Regulator, LysR family (NCBI) | insig. | 32 | 80 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS28220 | | LysR family transcriptional regulator | insig. | 28 | 98 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS28220 | | LysR family transcriptional regulator | sig. | 28 | 98 |
| | Pseudomonas putida KT2440 | PP_4460 | | Transcriptional regulator, LysR family | insig. | 27 | 97 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS12355 | | LysR family transcriptional regulator | insig. | 29 | 81 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_24340 | | LysR family transcriptional regulator | insig. | 27 | 93 |
| | Rahnella sp. WP5 | EX31_RS09230 | | LysR family transcriptional regulator | insig. | 31 | 71 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_17030 | | LysR family transcriptional regulator | insig. | 28 | 91 |
| | Erwinia tracheiphila SCR3 | LU632_RS06035 | | LysR family transcriptional regulator | insig. | 28 | 91 |
| | Pectobacterium carotovorum WPP14 | HER17_RS03705 | | LysR family transcriptional regulator | cofit | 28 | 95 |