| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Azospirillum sp. SherDot2 | MPMX19_04783 | | Ubiquinone biosynthesis O-methyltransferase, mitochondrial | insig. | 100 | 100 |
| | Bosea sp. OAE506 | ABIE41_RS01440 | | methyltransferase domain-containing protein | insig. | 34 | 47 |
| | Caulobacter crescentus NA1000 | CCNA_01922 | | SAM-dependent methyltransferase | strong | 35 | 44 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_01922 | | SAM-dependent methyltransferase | cofit | 35 | 44 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1408 | mapA | membrane-associated protein | insig. | 32 | 45 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3105 | | Methyltransferase domain | strong | 31 | 57 |
| | Azospirillum sp. SherDot2 | MPMX19_03826 | | putative methyltransferase | no data | 33 | 39 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS13315 | | class I SAM-dependent methyltransferase | insig. | 36 | 34 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS13315 | | class I SAM-dependent methyltransferase | insig. | 36 | 34 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3122 | | Methyltransferase domain | insig. | 36 | 32 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1849 | | Conserved domain protein | cofit | 35 | 36 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_0596 | | delta(24)-sterol C-methyltransferase | strong | 32 | 57 |
| | Variovorax sp. SCN45 | GFF6026 | | no description | insig. | 26 | 59 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS32430 | | SAM-dependent methyltransferase | insig. | 36 | 34 |
| | Mycobacterium tuberculosis H37Rv | Rv1523 | | Probable methyltransferase | insig. | 33 | 33 |
| | Serratia liquefaciens MT49 | IAI46_00185 | | class I SAM-dependent methyltransferase | insig. | 33 | 38 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS01985 | | class I SAM-dependent methyltransferase | cofit | 28 | 39 |
| | Mycobacterium tuberculosis H37Rv | Rv3030 | | Conserved protein | no data | 32 | 37 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS05645 | | glycosyltransferase | strong | 33 | 33 |
| | Rhodopseudomonas palustris CGA009 | TX73_020565 | | class I SAM-dependent methyltransferase | insig. | 33 | 33 |
| | Pseudomonas simiae WCS417 | PS417_12620 | | SAM-dependent methyltransferase | insig. | 31 | 45 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS06060 | | class I SAM-dependent methyltransferase | insig. | 29 | 33 |
| | Azospirillum brasilense Sp245 | AZOBR_RS31990 | | hypothetical protein | insig. | 32 | 42 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_14695 | | Methyltransf-11 domain-containing protein | insig. | 31 | 41 |
| | Bosea sp. OAE506 | ABIE41_RS02030 | | class I SAM-dependent methyltransferase | insig. | 29 | 46 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS18760 | | glycosyltransferase | strong | 33 | 36 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS00510 | | class I SAM-dependent methyltransferase | insig. | 37 | 33 |
| | Paraburkholderia graminis OAS925 | ABIE53_001147 | | ubiquinone/menaquinone biosynthesis C-methylase UbiE/glycosyltransferase involved in cell wall biosynthesis/regulator of replication initiation timing | strong | 30 | 35 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS05275 | | methyltransferase domain-containing protein | insig. | 45 | 18 |
| | Enterobacter sp. TBS_079 | MPMX20_01405 | | Malonyl-[acyl-carrier protein] O-methyltransferase | sig. | 29 | 41 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1903 | | glycosyl transferase, family 2 | no data | 32 | 39 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS20330 | | class I SAM-dependent methyltransferase | no data | 36 | 34 |
| | Variovorax sp. SCN45 | GFF304 | | Ubiquinone/menaquinone biosynthesis methyltransferase family protein | insig. | 32 | 43 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0919 | | Chromosome segregation ATPase-like protein | strong | 30 | 37 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0919 | | Chromosome segregation ATPase-like protein | strong | 30 | 37 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS23400 | | class I SAM-dependent methyltransferase | insig. | 28 | 38 |
| | Klebsiella michiganensis M5al | BWI76_RS14735 | | type 11 methyltransferase | sig. | 31 | 44 |
| | Agrobacterium fabrum C58 | Atu3392 | | methyltransferase | insig. | 26 | 66 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS04905 | | class I SAM-dependent methyltransferase | insig. | 38 | 33 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS05125 | | class I SAM-dependent methyltransferase | insig. | 38 | 33 |
| | Marinobacter adhaerens HP15 | HP15_2860 | | methyltransferase | cofit | 36 | 33 |
| | Mycobacterium tuberculosis H37Rv | Rv3342 | | Possible methyltransferase (methylase) | sig. | 35 | 33 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS17555 | | class I SAM-dependent methyltransferase | insig. | 30 | 38 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS03430 | | SAM-dependent methyltransferase | insig. | 34 | 34 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS28580 | | methyltransferase domain-containing protein | insig. | 34 | 37 |
| | Sinorhizobium meliloti 1021 | SM_b21433 | | methyl-transferase, S-adenosyl-L-methionine (SAM)-MTase | insig. | 32 | 37 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS02885 | | class I SAM-dependent methyltransferase | insig. | 32 | 40 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_08880 | | SAM-dependent methyltransferase | insig. | 26 | 43 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3788 | | PUTATIVE METHYLTRANSFERASE | insig. | 38 | 32 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4248 | | SAM-dependent methyltransferases | sig. | 32 | 35 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS05575 | | class I SAM-dependent methyltransferase | sig. | 50 | 17 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_20690 | | SAM-dependent methyltransferase | insig. | 31 | 33 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS15150 | | class I SAM-dependent methyltransferase | insig. | 29 | 34 |
| | Shewanella oneidensis MR-1 | SO3266 | | conserved domain protein (NCBI ptt file) | insig. | 24 | 43 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS11800 | | 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase | strong | 36 | 36 |
| | Serratia liquefaciens MT49 | IAI46_06535 | | malonyl-ACP O-methyltransferase BioC | insig. | 31 | 34 |
| | Dickeya dadantii 3937 | DDA3937_RS11305 | | 23S rRNA (guanine(745)-N(1))-methyltransferase | insig. | 29 | 38 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS10020 | | class I SAM-dependent methyltransferase | insig. | 30 | 40 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS17095 | | SAM-dependent methyltransferase | insig. | 33 | 35 |
| | Pseudomonas sp. S08-1 | OH686_12015 | | hypothetical protein | strong | 31 | 33 |
| | Marinobacter adhaerens HP15 | HP15_2763 | | methyltransferase, UbiE/COQ5 family protein | insig. | 30 | 36 |
| | Dickeya dianthicola 67-19 | HGI48_RS11340 | | 23S rRNA (guanine(745)-N(1))-methyltransferase | insig. | 29 | 42 |
| | Klebsiella michiganensis M5al | BWI76_RS05430 | | UbiE/COQ5 family methyltransferase | sig. | 34 | 33 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2245 | | Methyltransferase type 11 (RefSeq) | insig. | 34 | 37 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS07290 | | SAM-dependent methyltransferase | insig. | 32 | 32 |
| | Variovorax sp. OAS795 | ABID97_RS16745 | | class I SAM-dependent methyltransferase | cofit | 32 | 43 |
| | Azospirillum brasilense Sp245 | AZOBR_RS19390 | | methyltransferase | sig. | 31 | 34 |
| | Ralstonia solanacearum GMI1000 | RS_RS15160 | | class I SAM-dependent methyltransferase | insig. | 29 | 40 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_17020 | | methyltransferase type 11 | strong | 28 | 48 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS19215 | | class I SAM-dependent methyltransferase | insig. | 42 | 18 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1301 | | Methyltransferase domain | strong | 37 | 38 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02776 | | putative methyltransferase | cofit | 33 | 33 |
| | Acinetobacter baumannii LAC-4 | RR41_RS01835 | | class I SAM-dependent methyltransferase | insig. | 29 | 34 |
| | Cellulophaga baltica 18 | M666_RS08675 | | class I SAM-dependent methyltransferase | no data | 32 | 27 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS03690 | | class I SAM-dependent methyltransferase | cofit | 32 | 34 |
| | Xanthobacter sp. DMC5 | GFF1793 | | Aklanonic acid methyltransferase DauC | no data | 30 | 42 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4305 | | PUTATIVE METHYLTRANSFERASE | insig. | 37 | 33 |
| | Shewanella sp. ANA-3 | Shewana3_2463 | | methyltransferase type 11 (RefSeq) | insig. | 29 | 32 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS14495 | | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | no data | 26 | 46 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS24960 | | class I SAM-dependent methyltransferase | insig. | 33 | 44 |
| | Dickeya dadantii 3937 | DDA3937_RS08520 | | malonyl-ACP O-methyltransferase BioC | insig. | 28 | 34 |
| | Dechlorosoma suillum PS | Dsui_0223 | | methylase involved in ubiquinone/menaquinone biosynthesis | cofit | 35 | 33 |
| | Dinoroseobacter shibae DFL-12 | Dshi_3400 | | ubiquinone biosynthesis O-methyltransferase (RefSeq) | insig. | 34 | 37 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS11170 | | class I SAM-dependent methyltransferase | insig. | 35 | 33 |
| | Mycobacterium tuberculosis H37Rv | Rv0558 | | Probable ubiquinone/menaquinone biosynthesis methyltransferase MenH (2-heptaprenyl-1,4-naphthoquinone methyltransferase) | no data | 35 | 35 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2448 | | Methionine biosynthesis protein MetW | cofit | 34 | 36 |
| | Rhizobium sp. OAE497 | ABIE40_RS09965 | | class I SAM-dependent methyltransferase | insig. | 33 | 35 |
| | Sinorhizobium meliloti 1021 | SM_b21410 | | methyltransferase, S-adenosyl-L-methionine (SAM)-MTase | insig. | 33 | 35 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS04525 | | methyltransferase domain-containing protein | insig. | 33 | 25 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS04745 | | methyltransferase domain-containing protein | insig. | 33 | 25 |
| | Mycobacterium tuberculosis H37Rv | Rv3729 | | Possible transferase | insig. | 32 | 40 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1199 | | Methyltransferase domain. | sig. | 29 | 41 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_21230 | | hypothetical protein | insig. | 29 | 49 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2214 | | malonyl-acyl carrier protein O-methyltransferase BioC | insig. | 28 | 51 |
| | Erwinia amylovora T8 | OLJFJH_16750 | | malonyl-ACP O-methyltransferase BioC | insig. | 27 | 36 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2188 | | Methyltransferase domain. | strong | 26 | 41 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS03780 | | malonyl-ACP O-methyltransferase BioC | cofit | 26 | 39 |
| | Rhodospirillum rubrum S1H | Rru_A2736 | | hypothetical protein (NCBI) | cofit | 36 | 27 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_01230 | | class I SAM-dependent methyltransferase | cofit | 35 | 38 |
| | Bosea sp. OAE506 | ABIE41_RS02445 | | class I SAM-dependent methyltransferase | insig. | 33 | 34 |