| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Azospirillum sp. SherDot2 | MPMX19_03207 | | hypothetical protein | cofit | 100 | 100 |
| | Azospirillum sp. SherDot2 | MPMX19_03206 | | HTH-type transcriptional activator RhaS | cofit | 45 | 97 |
| | Bosea sp. OAE506 | ABIE41_RS18945 | | AraC family transcriptional regulator | insig. | 40 | 97 |
| | Sinorhizobium meliloti 1021 | SMc01610 | | transcriptional regulator | insig. | 34 | 91 |
| | Azospirillum brasilense Sp245 | AZOBR_RS17970 | | AraC family transcriptional regulator | insig. | 38 | 72 |
| | Rhizobium sp. OAE497 | ABIE40_RS20540 | | AraC family transcriptional regulator | sig. | 32 | 92 |
| | Agrobacterium fabrum C58 | Atu0410 | | transcriptional regulator, AraC family | insig. | 36 | 74 |
| | Sinorhizobium meliloti 1021 | SMa1749 | | transcriptional regulator | insig. | 31 | 71 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4948 | | Transcriptional regulator, AraC family | sig. | 35 | 53 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_19455 | | AraC family transcriptional regulator | insig. | 34 | 53 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5308 | | Transcriptional regulator, AraC family | strong | 31 | 53 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_13545 | | AraC family transcriptional regulator | insig. | 35 | 39 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS18340 | | helix-turn-helix domain-containing protein | insig. | 33 | 41 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_16915 | | AraC family transcriptional regulator | sig. | 31 | 53 |
| | Xanthobacter sp. DMC5 | GFF1541 | | HTH-type transcriptional activator RhaR | insig. | 32 | 51 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS17030 | | AraC family transcriptional regulator | insig. | 31 | 55 |
| | Pseudomonas sp. SVBP6 | COO64_RS11410 | | AraC family transcriptional regulator | insig. | 32 | 53 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_01030 | | AraC family transcriptional regulator | insig. | 34 | 61 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1007 | | Transcriptional regulator, AraC family | insig. | 33 | 50 |
| | Rhodopseudomonas palustris CGA009 | TX73_010875 | | AraC family transcriptional regulator | insig. | 38 | 33 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_04870 | | AraC family transcriptional regulator | strong | 27 | 76 |
| | Pseudomonas sp. RS175 | PFR28_00233 | | HTH-type transcriptional activator RhaS | insig. | 31 | 53 |
| | Sinorhizobium meliloti 1021 | SM_b21336 | | AraC family transcriptional regulator | insig. | 27 | 81 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_22260 | | AraC family transcriptional regulator | no data | 42 | 33 |
| | Sinorhizobium meliloti 1021 | SMa1822 | | hypothetical protein | insig. | 32 | 38 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1041 | | transcriptional regulator, AraC family | insig. | 31 | 52 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1041 | | transcriptional regulator, AraC family | insig. | 31 | 52 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS30415 | | AraC family transcriptional regulator | insig. | 37 | 29 |
| | Pseudomonas sp. DMC3 | GFF1896 | | HTH-type transcriptional activator RhaS | cofit | 32 | 50 |
| | Pseudomonas sp. DMC3 | GFF2807 | | HTH-type transcriptional activator RhaS | insig. | 39 | 33 |
| | Enterobacter sp. TBS_079 | MPMX20_02241 | | HTH-type transcriptional activator RhaS | sig. | 37 | 36 |
| | Paraburkholderia graminis OAS925 | ABIE53_002253 | | AraC family transcriptional regulator | insig. | 38 | 29 |
| | Rhodopseudomonas palustris CGA009 | TX73_006775 | | AraC family transcriptional regulator | insig. | 37 | 34 |
| | Acinetobacter baumannii LAC-4 | RR41_RS12805 | | AraC family transcriptional regulator | insig. | 30 | 52 |
| | Pseudomonas simiae WCS417 | PS417_23415 | | AraC family transcriptional regulator | sig. | 30 | 52 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS05450 | | AraC family transcriptional regulator | no data | 41 | 32 |
| | Pseudomonas sp. DMC3 | GFF934 | | HTH-type transcriptional activator RhaR | no data | 41 | 33 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3865 | | Transcriptional regulator, AraC family | insig. | 40 | 33 |
| | Pseudomonas putida KT2440 | PP_5244 | | Transcriptional regulator, AraC family | insig. | 39 | 29 |
| | Pseudomonas sp. RS175 | PFR28_01504 | | HTH-type transcriptional activator RhaR | insig. | 34 | 36 |
| | Azospirillum sp. SherDot2 | MPMX19_02871 | | HTH-type transcriptional activator RhaR | insig. | 36 | 33 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS22565 | | AraC family transcriptional regulator | insig. | 33 | 46 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS25245 | | helix-turn-helix transcriptional regulator | insig. | 29 | 52 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS25245 | | helix-turn-helix transcriptional regulator | sig. | 29 | 52 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04830 | | HTH-type transcriptional activator RhaS | cofit | 30 | 52 |
| | Paraburkholderia graminis OAS925 | ABIE53_004694 | | AraC family transcriptional regulator | insig. | 29 | 54 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03396 | | AraC-type DNA-binding protein | insig. | 27 | 62 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5915 | | Transcriptional regulator, AraC family | no data | 37 | 42 |
| | Rhodospirillum rubrum S1H | Rru_A0536 | | Transcriptional Regulator, AraC family (NCBI) | insig. | 29 | 48 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00041 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 28 | 48 |
| | Pseudomonas stutzeri RCH2 | Psest_3080 | | AraC-type DNA-binding domain-containing proteins | sig. | 35 | 45 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02634 | | HTH-type transcriptional activator Btr | no data | 36 | 33 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS25940 | | AraC family transcriptional regulator | insig. | 35 | 29 |
| | Sphingobium sp. HT1-2 | GFF1835 | | Transcriptional regulator, AraC family | cofit | 39 | 33 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01105 | | transcriptional regulator, AraC family | insig. | 34 | 29 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS23660 | | AraC family transcriptional regulator | insig. | 32 | 38 |
| | Dinoroseobacter shibae DFL-12 | Dshi_2282 | | transcriptional regulator, AraC family (RefSeq) | insig. | 36 | 33 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_03355 | | AraC family transcriptional regulator | insig. | 35 | 45 |
| | Rhodospirillum rubrum S1H | Rru_A0919 | | Two Component Transcriptional Regulator, AraC family (NCBI) | insig. | 31 | 37 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS34420 | | AraC family transcriptional regulator | insig. | 27 | 65 |
| | Xanthobacter sp. DMC5 | GFF3380 | | HTH-type transcriptional activator RhaR | insig. | 32 | 47 |
| | Enterobacter sp. TBS_079 | MPMX20_02552 | | HTH-type transcriptional activator RhaR | insig. | 32 | 36 |
| | Sinorhizobium meliloti 1021 | SM_b21559 | | AraC family transcriptional regulator | insig. | 29 | 54 |
| | Pseudomonas sp. S08-1 | OH686_19610 | | Transcriptional regulator, AraC family | insig. | 37 | 37 |
| | Serratia liquefaciens MT49 | IAI46_11980 | | helix-turn-helix transcriptional regulator | insig. | 37 | 34 |
| | Pseudomonas simiae WCS417 | PS417_16110 | | AraC family transcriptional regulator | no data | 35 | 33 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1249 | | Transcriptional regulator, AraC family | insig. | 26 | 93 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS22610 | | AraC family transcriptional regulator | insig. | 37 | 30 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00894 | | hypothetical protein | cofit | 29 | 56 |
| | Pseudomonas sp. S08-1 | OH686_02580 | | hypothetical protein | insig. | 35 | 36 |
| | Sinorhizobium meliloti 1021 | SMa0319 | | AraC family transcriptional regulator | insig. | 34 | 33 |
| | Pseudomonas sp. BP01 | JOY50_RS15480 | | helix-turn-helix domain-containing protein | insig. | 32 | 53 |
| | Dinoroseobacter shibae DFL-12 | Dshi_4172 | | transcriptional regulator, AraC family (RefSeq) | no data | 31 | 53 |
| | Azospirillum sp. SherDot2 | MPMX19_01511 | | HTH-type transcriptional activator RhaR | insig. | 33 | 42 |
| | Rhodopseudomonas palustris CGA009 | TX73_005540 | | AraC family transcriptional regulator | insig. | 34 | 34 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_20095 | | transcriptional regulator MdrR1 | insig. | 34 | 36 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_6006 | | L-rhamnose operon transcriptional activator RhaR | insig. | 28 | 53 |
| | Pseudomonas segetis P6 | MPMX49_01419 | | HTH-type transcriptional activator RhaS | insig. | 37 | 33 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS18080 | | helix-turn-helix transcriptional regulator | insig. | 35 | 33 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS18080 | | helix-turn-helix transcriptional regulator | insig. | 35 | 33 |
| | Agrobacterium fabrum C58 | Atu0865 | | transcriptional regulator, AraC family | insig. | 35 | 41 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2318 | | FIG229276: Transcriptional regulator, AraC family | insig. | 34 | 36 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS00535 | | AraC family transcriptional regulator | insig. | 33 | 39 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3186 | | Transcriptional regulator, AraC family | insig. | 34 | 34 |
| | Pseudomonas sp. S08-1 | OH686_07125 | | Transcriptional regulator, AraC family | insig. | 34 | 53 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37540 | | AraC family transcriptional regulator | cofit | 33 | 33 |
| | Xanthobacter sp. DMC5 | GFF4033 | | HTH-type transcriptional activator RhaS | insig. | 32 | 35 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1125 | | Transcriptional regulator, AraC family | insig. | 31 | 40 |
| | Pseudomonas sp. SVBP6 | COO64_RS23480 | | response regulator transcription factor | insig. | 34 | 35 |
| | Pseudomonas stutzeri RCH2 | Psest_2061 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 33 | 36 |
| | Pseudomonas putida KT2440 | PP_5245 | | Transcriptional regulator, AraC family | insig. | 33 | 33 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS08665 | | AraC family transcriptional regulator | insig. | 31 | 53 |
| | Rhodopseudomonas palustris CGA009 | TX73_006805 | | AraC family transcriptional regulator | insig. | 30 | 49 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS18555 | | AraC family transcriptional regulator | insig. | 28 | 69 |
| | Pseudomonas sp. SVBP6 | COO64_RS07890 | | AraC family transcriptional regulator | no data | 41 | 28 |
| | Rahnella sp. WP5 | EX31_RS03030 | | helix-turn-helix transcriptional regulator | strong | 30 | 36 |
| | Klebsiella michiganensis M5al | BWI76_RS13355 | | AraC family transcriptional regulator | insig. | 28 | 54 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_23660 | | AraC family transcriptional regulator | insig. | 26 | 75 |
| | Cellulophaga baltica 18 | M666_RS07365 | | AraC family transcriptional regulator | insig. | 33 | 34 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS14630 | | AraC family transcriptional regulator | sig. | 32 | 37 |