Homologs of MMJJ_RS01415 from Methanococcus maripaludis JJ

beta-CASP ribonuclease aCPSF1
SEED: Protein similar to polyadenylation specificity factor, MJ1236 type

80 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Methanococcus maripaludis JJ MMJJ_RS01415 beta-CASP ribonuclease aCPSF1 sig. 100 100
o Methanococcus maripaludis S2 MMP_RS03635 beta-CASP ribonuclease aCPSF1 no data 100 100
  Methanococcus maripaludis JJ MMJJ_RS07240 MBL fold metallo-hydrolase strong 35 70
  Methanococcus maripaludis S2 MMP_RS07115 MBL fold metallo-hydrolase strong 35 70
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0356 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain insig. 29 72
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS01315 MBL fold metallo-hydrolase RNA specificity domain-containing protein insig. 31 67
  Alteromonas macleodii MIT1002 MIT1002_03270 Ribonuclease insig. 31 66
  Methanococcus maripaludis S2 MMP_RS02290 MBL fold metallo-hydrolase strong 33 66
  Pseudomonas sp. RS175 PFR28_02316 Ribonuclease insig. 30 67
  Pseudomonas stutzeri RCH2 Psest_2869 Predicted exonuclease of the beta-lactamase fold involved in RNA processing insig. 30 71
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_21655 MBL fold hydrolase insig. 29 71
  Methanococcus maripaludis JJ MMJJ_RS02985 MBL fold metallo-hydrolase strong 33 66
  Pseudomonas putida KT2440 PP_3291 Metallo-beta-lactamase family protein insig. 31 67
  Desulfovibrio vulgaris Hildenborough JW710 DVU1530 metallo-beta-lactamase family protein (TIGR) insig. 29 72
  Desulfovibrio vulgaris Miyazaki F DvMF_0171 beta-lactamase domain protein (RefSeq) sig. 28 71
  Ralstonia sp. UNC404CL21Col ABZR87_RS19990 MBL fold metallo-hydrolase insig. 29 67
  Pseudomonas putida KT2440 PP_1775 Metallo-beta-lactamase family protein strong 30 66
  Marinobacter adhaerens HP15 HP15_2406 metallo-beta-lactamase family protein insig. 29 67
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1519 Metallo-beta-lactamase family protein, RNA-specific insig. 29 67
  Cellulophaga baltica 18 M666_RS11770 MBL fold metallo-hydrolase insig. 29 67
  Pseudomonas sp. BP01 JOY50_RS16110 MBL fold metallo-hydrolase RNA specificity domain-containing protein insig. 30 69
  Castellaniella sp019104865 MT123 ABCV34_RS06000 MBL fold metallo-hydrolase insig. 29 66
  Burkholderia phytofirmans PsJN BPHYT_RS27805 RNA-metabolising metallo-beta-lactamase insig. 28 67
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS01950 MBL fold metallo-hydrolase insig. 29 72
  Pseudomonas aeruginosa PA14 IKLFDK_18450 MBL fold metallo-hydrolase strong 29 67
  Cupriavidus basilensis FW507-4G11 RR42_RS09610 mRNA 3'-end processing factor insig. 29 67
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3165 Predicted exonuclease of the beta-lactamase fold involved in RNA processing insig. 29 67
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05985 MBL fold hydrolase insig. 30 68
  Pseudomonas aeruginosa MRSN321 DY961_RS14910 MBL fold metallo-hydrolase insig. 29 67
  Variovorax sp. SCN45 GFF6952 Metallo-beta-lactamase family protein, RNA-specific insig. 31 67
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS04385 MBL fold metallo-hydrolase insig. 30 69
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS11070 MBL fold metallo-hydrolase insig. 29 71
  Pseudomonas aeruginosa PUPa3 DQ20_RS42220 MBL fold metallo-hydrolase insig. 29 67
  Pseudomonas fluorescens FW300-N2C3 AO356_23925 mRNA 3'-end processing factor insig. 27 72
  Rhodanobacter denitrificans MT42 LRK55_RS13890 MBL fold metallo-hydrolase insig. 28 68
  Lysobacter sp. OAE881 ABIE51_RS06640 MBL fold metallo-hydrolase insig. 28 64
  Dechlorosoma suillum PS Dsui_1635 putative exonuclease of the beta-lactamase fold involved in RNA processing cofit 29 67
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS14440 MBL fold metallo-hydrolase insig. 28 68
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14170 MBL fold metallo-hydrolase insig. 28 68
  Shewanella loihica PV-4 Shew_3327 RNA-metabolising metallo-beta-lactamase (RefSeq) insig. 29 66
  Rhodanobacter sp. FW510-T8 OKGIIK_00845 ySH1 MBL fold metallo-hydrolase insig. 31 66
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3226 Metallo-beta-lactamase family protein, RNA-specific insig. 28 66
  Ralstonia solanacearum GMI1000 RS_RS00995 MBL fold metallo-hydrolase insig. 27 71
  Shewanella amazonensis SB2B Sama_0497 metallo-beta-lactamase family protein (RefSeq) insig. 28 66
  Shewanella oneidensis MR-1 SO0541 metallo-beta-lactamase family protein (NCBI ptt file) insig. 29 66
  Pseudomonas fluorescens FW300-N2E3 AO353_19925 mRNA 3'-end processing factor insig. 28 67
  Kangiella aquimarina DSM 16071 B158DRAFT_1606 Predicted exonuclease of the beta-lactamase fold involved in RNA processing insig. 30 66
  Vibrio cholerae E7946 ATCC 55056 CSW01_01365 MBL fold hydrolase cofit 29 66
  Rhodopseudomonas palustris CGA009 TX73_021505 MBL fold metallo-hydrolase insig. 29 68
  Marinobacter adhaerens HP15 HP15_2380 metallo-beta-lactamase family protein insig. 28 70
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS14480 MBL fold metallo-hydrolase insig. 30 69
  Shewanella sp. ANA-3 Shewana3_0537 aspartate kinase (RefSeq) insig. 29 66
  Sphingobium sp. HT1-2 GFF4359 Metallo-beta-lactamase family protein, RNA-specific insig. 28 66
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20845 MBL fold hydrolase insig. 28 67
  Acidovorax sp. GW101-3H11 Ac3H11_1523 Metallo-beta-lactamase family protein, RNA-specific insig. 30 68
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3814 Predicted exonuclease of the beta-lactamase fold involved in RNA processing insig. 27 71
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS09240 MBL fold metallo-hydrolase insig. 27 67
  Rhodanobacter denitrificans MT42 LRK55_RS13845 MBL fold metallo-hydrolase insig. 30 66
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14125 MBL fold metallo-hydrolase insig. 30 66
  Azospirillum brasilense Sp245 AZOBR_RS07000 beta-lactamase insig. 28 66
  Azospirillum sp. SherDot2 MPMX19_05334 hypothetical protein insig. 28 66
  Sinorhizobium meliloti 1021 SMa1131 Metallo-beta-lactamase superfamily protein insig. 29 66
  Pseudomonas syringae pv. syringae B728a Psyr_3639 Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase insig. 28 67
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3639 Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase insig. 28 67
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS18635 MBL fold metallo-hydrolase insig. 28 68
  Kangiella aquimarina DSM 16071 B158DRAFT_1678 Predicted exonuclease of the beta-lactamase fold involved in RNA processing insig. 28 65
  Pseudomonas stutzeri RCH2 Psest_1808 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain insig. 27 64
  Sphingobium sp. HT1-2 GFF5006 Metallo-beta-lactamase family protein, RNA-specific cofit 27 68
  Caulobacter crescentus NA1000 CCNA_00854 metallo-beta-lactamase protein insig. 27 67
  Caulobacter crescentus NA1000 Δfur CCNA_00854 metallo-beta-lactamase protein cofit 27 67
  Marinobacter adhaerens HP15 HP15_1324 metallo-beta-lactamase family protein insig. 29 55
  Synechocystis sp000284455 PCC 6803 SGL_RS16630 MBL fold metallo-hydrolase strong 23 71
  Agrobacterium fabrum C58 Atu1285 metal dependent hydrolase strong 25 71
  Mycobacterium tuberculosis H37Rv Rv2752c Conserved hypothetical protein sig. 25 39
  Desulfovibrio vulgaris Miyazaki F DvMF_2926 beta-lactamase domain protein (RefSeq) strong 35 14
  Bifidobacterium breve UCC2003 BBR_RS13000 RNase J family beta-CASP ribonuclease no data 31 14
  Bosea sp. OAE506 ABIE41_RS17865 ribonuclease J sig. 37 14
  Desulfovibrio vulgaris Hildenborough JW710 DVU0876 metallo-beta-lactamase family protein (TIGR) strong 28 14
  Fusobacterium nucleatum SB010 HUW76_04205 ribonuclease J no data 33 14
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS13225 exonuclease sig. 27 31