Homologs of HMPREF1058_RS04015 from Phocaeicola vulgatus CL09T03C04

ATP-dependent Clp protease ATP-binding subunit
SEED: ATP-dependent Clp protease ATP-binding subunit ClpA
KEGG: ATP-dependent Clp protease ATP-binding subunit ClpC

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS04015 ATP-dependent Clp protease ATP-binding subunit strong 100 100
o Phocaeicola dorei CL03T12C01 ABI39_RS17205 ATP-dependent Clp protease ATP-binding subunit sig. 98 100
o Bacteroides thetaiotaomicron VPI-5482 BT0898 ATP-dependent Clp protease (NCBI ptt file) no data 79 100
o Bacteroides ovatus ATCC 8483 BACOVA_00721 ATPase family associated with various cellular activities (AAA) strong 79 100
o Bacteroides stercoris CC31F HMPREF1181_RS16410 ATP-dependent Clp protease ATP-binding subunit strong 76 100
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS02400 ATP-dependent Clp protease ATP-binding subunit strong 66 100
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14890 Clp protease ClpC no data 60 99
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04820 ATP-dependent Clp protease ATP-binding subunit no data 59 100
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0369 ATPases with chaperone activity, ATP-binding subunit no data 59 100
o Cellulophaga baltica 18 M666_RS11645 ATP-dependent Clp protease ATP-binding subunit no data 58 100
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02100 Clp protease ClpC no data 58 100
o Synechococcus elongatus PCC 7942 Synpcc7942_0260 clpC ATPase no data 47 100
o Synechocystis sp000284455 PCC 6803 SGL_RS13375 ATP-dependent Clp protease ATP-binding subunit no data 47 100
o Mycobacterium tuberculosis H37Rv Rv3596c Probable ATP-dependent protease ATP-binding subunit ClpC1 no data 47 99
o Bifidobacterium breve UCC2003 BBR_RS17430 ATP-dependent Clp protease ATP-binding subunit no data 47 99
  Klebsiella michiganensis M5al BWI76_RS21440 ATP-dependent chaperone ClpB insig. 45 95
  Enterobacter sp. TBS_079 MPMX20_03461 Chaperone protein ClpB insig. 44 96
  Klebsiella pneumoniae MKP103 KDGMDA_02125 ATP-dependent chaperone ClpB insig. 44 95
  Escherichia coli BL21 ECD_02482 protein disaggregation chaperone cofit 44 97
  Escherichia fergusonii Becca EFB2_01298 Chaperone protein ClpB insig. 44 97
  Escherichia coli ECOR27 NOLOHH_12940 clpB ATP-dependent chaperone ClpB cofit 44 97
  Escherichia coli ECOR38 HEPCGN_20390 clpB ATP-dependent chaperone ClpB insig. 44 97
  Escherichia coli ECRC100 OKFHMN_21265 clpB ATP-dependent chaperone ClpB cofit 44 97
  Escherichia coli ECRC101 MCAODC_11795 clpB ATP-dependent chaperone ClpB insig. 44 97
  Escherichia coli ECRC102 NIAGMN_19035 clpB ATP-dependent chaperone ClpB insig. 44 97
  Escherichia coli ECRC62 BNILDI_11745 clpB ATP-dependent chaperone ClpB insig. 44 97
  Escherichia coli ECRC98 JDDGAC_24930 clpB ATP-dependent chaperone ClpB insig. 44 97
  Escherichia coli ECRC99 KEDOAH_06955 clpB ATP-dependent chaperone ClpB no data 44 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01114 Chaperone protein ClpB cofit 44 97
  Escherichia coli BW25113 b2592 clpB protein disaggregation chaperone (NCBI) sig. 44 97
  Escherichia coli Nissle 1917 ECOLIN_RS14665 ATP-dependent chaperone ClpB no data 44 97
  Pectobacterium carotovorum WPP14 HER17_RS05410 ATP-dependent chaperone ClpB insig. 43 96
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4184 ClpB protein sig. 43 97
  Enterobacter asburiae PDN3 EX28DRAFT_2693 ATP-dependent chaperone ClpB insig. 44 97
  Pantoea sp. MT58 IAI47_04435 ATP-dependent chaperone ClpB sig. 44 95
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16530 ATP-dependent chaperone ClpB cofit 44 96
  Pseudomonas aeruginosa PA14 IKLFDK_00820 Chaperone protein ClpB strong 50 77
  Lysobacter sp. OAE881 ABIE51_RS04925 ATP-dependent chaperone ClpB insig. 50 76
  Pseudomonas stutzeri RCH2 Psest_0711 ATP-dependent chaperone ClpB insig. 50 76
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_26855 clpB ATP-dependent chaperone ClpB cofit 44 97
  Erwinia tracheiphila SCR3 LU632_RS16935 clpB ATP-dependent chaperone ClpB strong 44 97
  Agrobacterium fabrum C58 Atu4177 ATP-dependent Clp protease, ATP-binding subunit insig. 48 79
  Paraburkholderia graminis OAS925 ABIE53_002033 ATP-dependent Clp protease ATP-binding subunit ClpB sig. 44 96
  Alteromonas macleodii MIT1002 MIT1002_02677 Heat shock protein F84.1 strong 42 99
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00817 ATP-dependent Clp protease ATP-binding subunit ClpB insig. 44 96
  Synechococcus elongatus PCC 7942 Synpcc7942_1089 clpB ATPase strong 42 99
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1495 ClpB protein sig. 50 75
  Pseudomonas sp. RS175 PFR28_03746 Chaperone protein ClpB sig. 49 75
  Pseudomonas fluorescens FW300-N2C3 AO356_15935 ATP-dependent chaperone ClpB cofit 49 75
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5129 ClpB protein strong 49 75
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2824 ClpB protein insig. 49 77
  Acinetobacter radioresistens SK82 MPMX26_01096 Chaperone protein ClpB cofit 43 98
  Erwinia amylovora T8 OLJFJH_09740 ATP-dependent chaperone ClpB sig. 43 96
  Vibrio cholerae E7946 ATCC 55056 CSW01_03705 chaperone protein ClpB insig. 43 98
  Dickeya dianthicola ME23 DZA65_RS17320 ATP-dependent chaperone ClpB insig. 42 96
  Burkholderia phytofirmans PsJN BPHYT_RS08990 protein disaggregation chaperone insig. 44 96
  Rahnella sp. WP5 EX31_RS07560 ATP-dependent chaperone ClpB strong 43 97
  Acinetobacter baumannii LAC-4 RR41_RS10060 ATP-dependent chaperone ClpB sig. 43 98
  Dickeya dianthicola 67-19 HGI48_RS16225 ATP-dependent chaperone ClpB insig. 43 96
  Shewanella amazonensis SB2B Sama_2603 clpB protein (RefSeq) sig. 42 98
  Pseudomonas simiae WCS417 PS417_03830 protein disaggregation chaperone strong 49 77
  Rhizobium sp. OAE497 ABIE40_RS17260 ATP-dependent chaperone ClpB sig. 49 76
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00971 Chaperone protein ClpB cofit 49 77
  Pseudomonas fluorescens SBW25 PFLU_RS03880 ATP-dependent chaperone ClpB insig. 49 77
  Pseudomonas fluorescens SBW25-INTG PFLU_RS03880 ATP-dependent chaperone ClpB strong 49 77
  Dickeya dadantii 3937 DDA3937_RS16100 ATP-dependent chaperone ClpB insig. 42 96
  Azospirillum brasilense Sp245 AZOBR_RS18950 ATPase AAA insig. 42 98
  Pseudomonas fluorescens FW300-N2E3 AO353_14230 ATP-dependent chaperone ClpB strong 49 76
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1382.1 ClpB protein insig. 49 76
  Sinorhizobium meliloti 1021 SMc02433 ATP-dependent protease insig. 43 98
  Pseudomonas syringae pv. syringae B728a Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal insig. 49 75
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal insig. 49 75
  Pseudomonas segetis P6 MPMX49_03920 Chaperone protein ClpB sig. 49 75
  Pseudomonas sp. SVBP6 COO64_RS11065 clpB ATP-dependent chaperone ClpB cofit 48 76
  Paraburkholderia sabiae LMG 24235 QEN71_RS22370 ATP-dependent chaperone ClpB insig. 43 96
  Shewanella sp. ANA-3 Shewana3_3169 ATPase (RefSeq) cofit 42 98
  Azospirillum sp. SherDot2 MPMX19_02442 Chaperone protein ClpB insig. 42 98
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS05055 ATP-dependent chaperone ClpB insig. 50 76
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11010 ATP-dependent chaperone ClpB insig. 42 98
  Dinoroseobacter shibae DFL-12 Dshi_0617 ATPase AAA-2 domain protein (RefSeq) insig. 42 98
  Shewanella oneidensis MR-1 SO3577 clpB clpB protein (NCBI ptt file) strong 42 98
  Pseudomonas sp. DMC3 GFF4006 Chaperone protein ClpB cofit 49 75
  Synechocystis sp000284455 PCC 6803 SGL_RS12190 ATP-dependent chaperone ClpB no data 41 99
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS04955 ATP-dependent chaperone ClpB strong 50 77
  Rhodanobacter denitrificans MT42 LRK55_RS04735 ATP-dependent chaperone ClpB cofit 50 76
  Pseudomonas sp. BP01 JOY50_RS27140 clpB ATP-dependent chaperone ClpB insig. 43 98
  Azospirillum brasilense Sp245 AZOBR_RS17845 ATPase AAA insig. 49 76
  Pseudomonas sp. S08-1 OH686_16420 ATP-dependent chaperone protein ClpB insig. 48 75
  Bosea sp. OAE506 ABIE41_RS23785 ATP-dependent chaperone ClpB insig. 42 98
  Rhodanobacter sp. FW510-T8 OKGIIK_01800 clpB ATP-dependent chaperone ClpB insig. 49 76
  Pseudomonas putida KT2440 PP_0625 Chaperone protein ClpB sig. 44 98
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS10940 ATP-dependent chaperone ClpB insig. 49 76
  Herbaspirillum seropedicae SmR1 HSERO_RS10545 protein disaggregation chaperone strong 41 98
  Kangiella aquimarina DSM 16071 B158DRAFT_2535 ATP-dependent chaperone ClpB insig. 41 98
  Rhodopseudomonas palustris CGA009 TX73_023005 ATP-dependent chaperone ClpB insig. 42 98
  Mycobacterium tuberculosis H37Rv Rv0384c Probable endopeptidase ATP binding protein (chain B) ClpB (ClpB protein) (heat shock protein F84.1) no data 47 79
  Variovorax sp. OAS795 ABID97_RS10930 ATP-dependent chaperone ClpB insig. 43 96
  Magnetospirillum magneticum AMB-1 AMB_RS07865 ATP-dependent chaperone ClpB sig. 46 79
  Caulobacter crescentus NA1000 CCNA_00922 ClpB protein strong 48 76
  Caulobacter crescentus NA1000 Δfur CCNA_00922 ClpB protein cofit 48 76