Homologs of GFF5323 from Variovorax sp. SCN45

Type IV pilus biogenesis protein PilQ
SEED: Type IV pilus biogenesis protein PilQ

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF5323 Type IV pilus biogenesis protein PilQ strong 100 100
o Variovorax sp. OAS795 ABID97_RS23265 type IV pilus secretin PilQ strong 88 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1333 Type IV pilus biogenesis protein PilQ cofit 64 98
o Acidovorax sp. GW101-3H11 Ac3H11_4703 Type IV pilus biogenesis protein PilQ insig. 59 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS02600 temperature dependent type IV pilus secretin PilQ strong 52 95
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS06945 type IV pilus secretin PilQ cofit 50 99
o Ralstonia solanacearum UW163 UW163_RS06670 type IV pilus secretin PilQ insig. 50 99
o Ralstonia solanacearum PSI07 RPSI07_RS10290 type IV pilus secretin PilQ cofit 50 99
o Ralstonia solanacearum GMI1000 RS_RS14890 type IV pilus secretin PilQ insig. 50 98
o Cupriavidus basilensis FW507-4G11 RR42_RS19015 secretin insig. 49 98
o Dechlorosoma suillum PS Dsui_1191 type IV pilus secretin PilQ/competence protein cofit 47 99
o Methylophilus sp. DMC18 GFF2234 Type 3 secretion system secretin insig. 45 95
o Herbaspirillum seropedicae SmR1 HSERO_RS20915 secretin insig. 42 97
o Pseudomonas sp. S08-1 OH686_10025 Type IV pilus biogenesis protein PilQ cofit 41 93
o Pseudomonas sp. RS175 PFR28_05011 Type 3 secretion system secretin insig. 40 99
o Pseudomonas fluorescens FW300-N2E3 AO353_12495 fimbrial protein insig. 41 92
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3756 Type IV pilus biogenesis protein PilQ insig. 41 92
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1539 Type IV pilus biogenesis protein PilQ insig. 42 92
o Pseudomonas fluorescens GW456-L13 PfGW456L13_277 Type IV pilus biogenesis protein PilQ insig. 41 92
o Pseudomonas syringae pv. syringae B728a Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein insig. 39 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein insig. 39 99
o Pseudomonas fluorescens FW300-N2C3 AO356_09395 fimbrial protein insig. 39 99
o Kangiella aquimarina DSM 16071 B158DRAFT_0762 type IV pilus secretin (or competence protein) PilQ cofit 38 96
o Pseudomonas aeruginosa MRSN321 DY961_RS11020 pilQ;inference=COORDINATES type 4a pilus secretin PilQ strong 39 98
o Pseudomonas sp. DMC3 GFF3098 Type IV pilus biogenesis and competence protein PilQ cofit 39 92
o Pseudomonas aeruginosa PUPa3 DQ20_RS51055 pilQ;inference=COORDINATES type 4a pilus secretin PilQ strong 40 93
o Pseudomonas aeruginosa PA14 IKLFDK_28330 type 4a pilus secretin PilQ strong 39 98
o Pseudomonas stutzeri RCH2 Psest_3715 type IV pilus secretin (or competence protein) PilQ strong 40 93
o Marinobacter adhaerens HP15 HP15_478 type 4 fimbrial biogenesis protein PilQ sig. 39 98
o Pseudomonas segetis P6 ACVTMO_RS21005 pilQ type IV pilus secretin PilQ cofit 38 93
o Acinetobacter radioresistens SK82 MPMX26_02812 Type 3 secretion system secretin cofit 38 91
o Rhodanobacter sp. FW510-T8 OKGIIK_12040 pilQ type IV pilus secretin PilQ cofit 39 93
o Acinetobacter baumannii LAC-4 RR41_RS01575 type IV pilus secretin PilQ insig. 37 98
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS11790 type IV pilus secretin PilQ cofit 38 95
o Rhodanobacter denitrificans MT42 LRK55_RS11580 type IV pilus secretin PilQ cofit 38 93
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS11855 type IV pilus secretin PilQ strong 38 93
o Shewanella amazonensis SB2B Sama_3369 type IV pilus biogenesis protein PilQ (RefSeq) insig. 37 90
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS16685 type IV pilus secretin PilQ cofit 38 93
o Shewanella oneidensis MR-1 SO0285 type IV pilus biogenesis protein PilQ (NCBI ptt file) insig. 37 90
o Shewanella sp. ANA-3 Shewana3_3895 type IV pilus secretin PilQ (RefSeq) insig. 36 90
o Shewanella loihica PV-4 Shew_0212 type IV pilus secretin PilQ (RefSeq) sig. 36 90
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1189.1 Type IV pilus biogenesis protein PilQ insig. 40 79
  Lysobacter sp. OAE881 ABIE51_RS17165 type IV pilus secretin PilQ family protein insig. 38 78
  Paraburkholderia sabiae LMG 24235 QEN71_RS28045 type IV pilus secretin PilQ insig. 44 61
  Burkholderia phytofirmans PsJN BPHYT_RS17895 secretin insig. 43 62
  Paraburkholderia graminis OAS925 ABIE53_003742 type IV pilus assembly protein PilQ insig. 43 61
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05613 type IV pilus assembly protein PilQ insig. 43 61
o Vibrio cholerae E7946 ATCC 55056 CSW01_13310 type IV pilus secretin PilQ insig. 37 81
o Alteromonas macleodii MIT1002 MIT1002_00449 Type IV pilus biogenesis and competence protein PilQ precursor insig. 37 82
  Pseudomonas orientalis W4I3 QF045_RS05040 type IV pilus secretin PilQ family protein insig. 43 63
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00628 Type IV pilus biogenesis and competence protein PilQ cofit 42 63
  Pseudomonas fluorescens SBW25 PFLU_RS02020 type IV pilus secretin PilQ family protein insig. 40 64
  Pseudomonas fluorescens SBW25-INTG PFLU_RS02020 type IV pilus secretin PilQ family protein insig. 40 64
  Pseudomonas sp. SVBP6 COO64_RS13065 type IV pilus secretin PilQ insig. 38 63
  Pseudomonas simiae WCS417 PS417_01975 pilus assembly protein PilQ insig. 40 63
  Pseudomonas putida KT2440 PP_5080 type 4 pili biogenesis protein insig. 37 63
  Pseudomonas sp. BP01 JOY50_RS09295 type IV pilus secretin PilQ insig. 37 64
  Pectobacterium carotovorum WPP14 HER17_RS01770 DNA uptake porin HofQ insig. 35 61
  Dickeya dianthicola 67-19 HGI48_RS19685 DNA uptake porin HofQ insig. 34 61
  Dickeya dianthicola ME23 DZA65_RS20770 DNA uptake porin HofQ insig. 34 61
  Dickeya dadantii 3937 DDA3937_RS19555 DNA uptake porin HofQ insig. 33 61
  Rahnella sp. WP5 EX31_RS04730 DNA uptake porin HofQ insig. 31 61
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_12025 hofQ DNA uptake porin HofQ cofit 30 61
  Erwinia tracheiphila SCR3 LU632_RS22875 hofQ DNA uptake porin HofQ insig. 30 61
  Pantoea sp. MT58 IAI47_01885 DNA uptake porin HofQ insig. 30 62
  Erwinia amylovora T8 OLJFJH_04100 DNA uptake porin HofQ insig. 31 61
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS21715 DNA uptake porin HofQ cofit 30 62
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF628 Type IV pilus biogenesis protein PilQ insig. 32 59
  Escherichia fergusonii Becca EFB2_00437 Type IV pilus biogenesis and competence protein PilQ insig. 30 61
  Escherichia coli ECRC100 OKFHMN_17105 hofQ DNA uptake porin HofQ cofit 30 61
  Escherichia coli ECRC101 MCAODC_07635 hofQ DNA uptake porin HofQ insig. 30 61
  Escherichia coli ECRC102 NIAGMN_14875 hofQ DNA uptake porin HofQ cofit 30 61
  Escherichia coli ECRC98 JDDGAC_20735 hofQ DNA uptake porin HofQ insig. 30 61
  Escherichia coli ECRC99 KEDOAH_11035 hofQ DNA uptake porin HofQ no data 30 61
  Escherichia coli ECOR38 HEPCGN_15925 hofQ DNA uptake porin HofQ insig. 30 61
  Escherichia coli ECRC62 BNILDI_02625 hofQ DNA uptake porin HofQ cofit 30 61
  Escherichia coli Nissle 1917 ECOLIN_RS19370 DNA uptake porin HofQ insig. 30 61
  Escherichia coli BW25113 b3391 hofQ predicted fimbrial transporter (NCBI) strong 30 61
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00312 Type IV pilus biogenesis and competence protein PilQ insig. 30 61
  Escherichia coli BL21 ECD_03243 DNA catabolic putative fimbrial transporter cofit 29 61
  Escherichia coli ECOR27 NOLOHH_08895 hofQ DNA uptake porin HofQ insig. 29 61
  Klebsiella pneumoniae MKP103 KDGMDA_06920 DNA uptake porin HofQ insig. 29 62
  Enterobacter sp. TBS_079 MPMX20_04280 Type IV pilus biogenesis and competence protein PilQ sig. 30 60
  Klebsiella michiganensis M5al BWI76_RS26100 DNA transporter HofQ insig. 32 61
  Enterobacter asburiae PDN3 EX28DRAFT_4151 type IV pilus secretin (or competence protein) PilQ insig. 28 61
  Desulfovibrio vulgaris Hildenborough JW710 DVU1273 bacterial type II/III secretion system protein (TIGR) strong 28 61
  Desulfovibrio vulgaris Miyazaki F DvMF_1027 type II and III secretion system protein (RefSeq) cofit 27 65
  Serratia liquefaciens MT49 IAI46_23715 DNA uptake porin HofQ insig. 42 22
  Dickeya dadantii 3937 DDA3937_RS14800 type II secretion system secretin GspD cofit 29 45
  Rahnella sp. WP5 EX31_RS16165 type II secretion system secretin GspD insig. 29 48
  Dickeya dianthicola 67-19 HGI48_RS14735 type II secretion system secretin GspD insig. 30 42
  Dickeya dianthicola ME23 DZA65_RS15680 type II secretion system secretin GspD cofit 30 42
  Erwinia amylovora T8 OLJFJH_01110 Type II secretion system protein GspD insig. 28 48
  Alteromonas macleodii MIT1002 MIT1002_03976 Pullulanase secretion envelope PulD strong 29 48
  Escherichia coli BW25113 b3325 yheF putative general protein secretion protein (VIMSS) insig. 28 55
  Enterobacter asburiae PDN3 EX28DRAFT_2079 type II secretion system protein D insig. 29 48
  Escherichia coli Nissle 1917 ECOLIN_RS19060 type II secretion system secretin GspD insig. 28 55
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00378 Putative type II secretion system protein D insig. 29 50
  Enterobacter sp. TBS_079 MPMX20_01515 Putative secretin GspD insig. 29 48
  Escherichia fergusonii Becca EFB2_00498 Putative secretin GspD insig. 27 55