Homologs of GFF4378 from Hydrogenophaga sp. GW460-11-11-14-LB1

Integrase
SEED: Integrase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4378 Integrase insig. 100 100
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4358 Integrase insig. 76 100
  Rhodopseudomonas palustris CGA009 TX73_011375 tyrosine-type recombinase/integrase insig. 68 99
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01203 Prophage integrase IntA insig. 58 94
  Pseudomonas aeruginosa PA14 IKLFDK_19405 integrase insig. 58 94
  Rhodospirillum rubrum S1H Rru_A0354 Phage integrase (NCBI) insig. 57 94
  Dickeya dianthicola ME23 DZA65_RS16600 site-specific integrase insig. 50 95
o Burkholderia phytofirmans PsJN BPHYT_RS32385 integrase insig. 52 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS06555 site-specific integrase insig. 52 94
  Escherichia coli ECRC98 JDDGAC_25445 integrase cofit 47 98
  Castellaniella sp019104865 MT123 ABCV34_RS11900 tyrosine-type recombinase/integrase insig. 38 93
  Escherichia coli ECRC62 BNILDI_09605 integrase cofit 34 94
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02321 Site-specific recombinase XerD insig. 35 95
o Paraburkholderia graminis OAS925 ABIE53_000331 integrase insig. 35 95
  Burkholderia phytofirmans PsJN BPHYT_RS19825 integrase sig. 37 95
o Erwinia amylovora T8 OLJFJH_17590 integrase insig. 32 96
  Dickeya dadantii 3937 DDA3937_RS16520 tyrosine-type recombinase/integrase insig. 33 95
  Serratia liquefaciens MT49 IAI46_05415 tyrosine-type recombinase/integrase insig. 33 93
  Ralstonia solanacearum PSI07 RPSI07_RS12430 DUF4102 domain-containing protein insig. 33 93
  Dickeya dianthicola 67-19 HGI48_RS14775 tyrosine-type recombinase/integrase insig. 32 95
  Dickeya dianthicola 67-19 HGI48_RS10980 tyrosine-type recombinase/integrase insig. 31 94
  Escherichia coli ECRC100 OKFHMN_09385 fimB integrase insig. 32 93
  Escherichia coli ECRC102 NIAGMN_07435 fimB integrase insig. 32 93
  Escherichia coli ECRC98 JDDGAC_13020 fimB integrase cofit 32 93
  Klebsiella michiganensis M5al BWI76_RS05825 putative site specific integrase insig. 32 93
  Pectobacterium carotovorum WPP14 HER17_RS04720 tyrosine-type recombinase/integrase insig. 33 92
  Ralstonia solanacearum GMI1000 RS_RS12480 DUF4102 domain-containing protein insig. 33 93
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1748 Integrase insig. 43 61
  Pectobacterium carotovorum WPP14 HER17_RS10440 tyrosine-type recombinase/integrase cofit 31 93
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS02275 integrase arm-type DNA-binding domain-containing protein insig. 31 95
  Escherichia coli BL21 ECD_03516 Int cofit 33 94
  Escherichia coli ECOR38 HEPCGN_14290 fimB integrase insig. 33 94
  Enterobacter asburiae PDN3 EX28DRAFT_2648 Integrase insig. 32 93
  Paraburkholderia graminis OAS925 ABIE53_002475 hypothetical protein insig. 45 52
  Serratia liquefaciens MT49 IAI46_09295 tyrosine-type recombinase/integrase insig. 31 93
  Pseudomonas stutzeri RCH2 Psest_4016 Integrase insig. 31 93
  Escherichia coli Nissle 1917 ECOLIN_RS26185 integrase arm-type DNA-binding domain-containing protein insig. 32 94
  Dechlorosoma suillum PS Dsui_0218 Integrase sig. 31 93
  Escherichia coli ECRC100 OKFHMN_15505 fimB integrase cofit 32 94
  Escherichia coli ECRC101 MCAODC_06015 fimB integrase insig. 32 94
  Escherichia coli ECRC102 NIAGMN_13265 fimB integrase insig. 32 94
  Escherichia coli ECRC98 JDDGAC_19130 fimB integrase cofit 32 94
  Escherichia coli ECRC99 KEDOAH_12640 fimB integrase no data 32 94
  Escherichia fergusonii Becca EFB2_00121 Prophage integrase IntS insig. 31 94
o Escherichia coli BW25113 b2442 intZ CPZ-55 prophage; predicted integrase (RefSeq) insig. 32 95
  Rahnella sp. WP5 EX31_RS20945 tyrosine-type recombinase/integrase insig. 30 95
  Ralstonia solanacearum GMI1000 RS_RS04790 DUF4102 domain-containing protein insig. 32 93
  Ralstonia solanacearum UW163 UW163_RS08775 integrase insig. 31 93
  Pseudomonas stutzeri RCH2 Psest_1102 Integrase insig. 32 94
  Cupriavidus basilensis FW507-4G11 RR42_RS18370 integrase insig. 30 96
  Acinetobacter radioresistens SK82 MPMX26_02861 Prophage integrase IntS insig. 28 93
  Pseudomonas simiae WCS417 PS417_10250 integrase insig. 31 92
  Desulfovibrio vulgaris Hildenborough JW710 DVU1527 site-specific recombinase, phage integrase family (TIGR) insig. 32 94
  Escherichia coli ECRC62 BNILDI_12605 Prophage integrase IntZ cofit 33 86
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1748 Integrase insig. 31 95
  Lysobacter sp. OAE881 ABIE51_RS08660 site-specific integrase insig. 32 96
  Pectobacterium carotovorum WPP14 HER17_RS17450 integrase domain-containing protein insig. 30 93
  Paraburkholderia sabiae LMG 24235 QEN71_RS29650 integrase arm-type DNA-binding domain-containing protein insig. 32 94
o Rhodanobacter denitrificans MT42 LRK55_RS10445 tyrosine-type recombinase/integrase cofit 29 96
  Enterobacter sp. TBS_079 MPMX20_00561 Prophage integrase IntA insig. 32 94
  Serratia liquefaciens MT49 IAI46_19665 tyrosine-type recombinase/integrase insig. 31 93
  Pantoea sp. MT58 IAI47_06050 tyrosine-type recombinase/integrase insig. 30 95
  Escherichia fergusonii Becca EFB2_04264 Prophage integrase IntA insig. 30 94
  Vibrio cholerae E7946 ATCC 55056 CSW01_04365 integrase insig. 29 92
  Dickeya dianthicola ME23 DZA65_RS04000 tyrosine-type recombinase/integrase insig. 30 92
  Erwinia amylovora T8 OLJFJH_07420 integrase insig. 29 94
  Serratia liquefaciens MT49 IAI46_02380 integrase arm-type DNA-binding domain-containing protein insig. 31 94
  Pseudomonas sp. DMC3 GFF4361 Prophage integrase IntA cofit 31 98
o Pseudomonas sp. S08-1 OH686_21775 Phage integrase insig. 30 93
  Enterobacter sp. TBS_079 MPMX20_00413 Prophage integrase IntS insig. 29 94
  Pectobacterium carotovorum WPP14 HER17_RS13585 integrase arm-type DNA-binding domain-containing protein insig. 28 99
  Escherichia coli ECOR27 NOLOHH_04000 fimB integrase cofit 31 94
  Dickeya dadantii 3937 DDA3937_RS03855 integrase insig. 31 90
  Erwinia tracheiphila SCR3 LU632_RS07185 tyrosine-type recombinase/integrase insig. 30 95
  Pseudomonas fluorescens SBW25 PFLU_RS09280 DUF4102 domain-containing protein insig. 30 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS09280 DUF4102 domain-containing protein insig. 30 94
  Escherichia coli ECOR38 HEPCGN_09925 intB Putative protein IntB insig. 29 93
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1201 Integrase insig. 29 95
  Escherichia coli BW25113 b2622 intA CP4-57 prophage; integrase (NCBI) insig. 31 91
  Escherichia fergusonii Becca EFB2_00934 Prophage integrase IntS no data 28 94
  Escherichia fergusonii Becca EFB2_04402 Prophage integrase IntS no data 28 94
  Pantoea sp. MT58 IAI47_04780 tyrosine-type recombinase/integrase insig. 29 93
  Escherichia coli BL21 ECD_04136 putative integrase insig. 29 93
  Escherichia coli ECOR38 HEPCGN_10690 integrase insig. 28 94
  Pseudomonas fluorescens SBW25 PFLU_RS24915 tyrosine-type recombinase/integrase insig. 30 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24915 tyrosine-type recombinase/integrase insig. 30 94
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1289.1 Integrase insig. 28 93
  Escherichia coli ECOR38 HEPCGN_18430 integrase insig. 28 94
  Escherichia coli Nissle 1917 ECOLIN_RS16505 integrase arm-type DNA-binding domain-containing protein insig. 28 94
  Acinetobacter radioresistens SK82 MPMX26_02101 Prophage integrase IntA insig. 31 93
  Erwinia tracheiphila SCR3 LU632_RS20815 tyrosine-type recombinase/integrase insig. 30 93
  Dickeya dianthicola ME23 DZA65_RS07740 integrase arm-type DNA-binding domain-containing protein insig. 27 96
  Shewanella loihica PV-4 Shew_1267 phage integrase family protein (RefSeq) insig. 26 96
  Pseudomonas fluorescens SBW25 PFLU_RS00900 tyrosine-type recombinase/integrase insig. 30 95
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00900 tyrosine-type recombinase/integrase insig. 30 95
  Shewanella sp. ANA-3 Shewana3_2953 phage integrase family protein (RefSeq) cofit 29 94
  Pectobacterium carotovorum WPP14 HER17_RS07975 integrase arm-type DNA-binding domain-containing protein cofit 28 94
  Escherichia coli ECRC100 OKFHMN_22520 intS prophage integrase IntS cofit 28 95
  Escherichia coli ECRC101 MCAODC_13050 intS prophage integrase IntS insig. 28 95
  Escherichia coli ECRC102 NIAGMN_20295 intS prophage integrase IntS insig. 28 95