Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2564 | | DNA repair nuclease with dnaQ and GIY-YIG domains (from data) | strong | 100 | 100 |
o | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_07430 | | DNA repair nuclease with dnaQ and GIY-YIG domains (from data) | strong | 42 | 99 |
o | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS07560 | | DNA polymerase III subunit epsilon | insig. | 45 | 90 |
o | Cellulophaga baltica 18 | M666_RS00695 | | exonuclease domain-containing protein | insig. | 42 | 98 |
o | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS13890 | | exonuclease domain-containing protein | insig. | 43 | 97 |
| Cellulophaga baltica 18 | M666_RS17600 | | exonuclease domain-containing protein | insig. | 34 | 99 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS36200 | | ethanolamine utilization protein | insig. | 37 | 80 |
| Dechlorosoma suillum PS | Dsui_0101 | | exonuclease, DNA polymerase III, epsilon subunit family | cofit | 37 | 80 |
| Marinobacter adhaerens HP15 | HP15_3043 | | DNA polymerase III, epsilon subunit | cofit | 35 | 81 |
o | Methylophilus sp. DMC18 | GFF1760 | | 3'-5' exonuclease DinG | insig. | 35 | 81 |
| Cellulophaga baltica 18 | M666_RS14615 | | exonuclease domain-containing protein | insig. | 31 | 91 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03997 | | DNA polymerase-3 subunit epsilon | insig. | 36 | 69 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS03705 | | exonuclease domain-containing protein | insig. | 36 | 69 |
| Burkholderia phytofirmans PsJN | BPHYT_RS15265 | | DNA polymerase III subunit epsilon | insig. | 36 | 61 |
| Alteromonas macleodii MIT1002 | MIT1002_03947 | | DNA polymerase III PolC-type | insig. | 52 | 37 |
| Mycobacterium tuberculosis H37Rv | Rv2191 | | Conserved hypothetical protein | insig. | 29 | 77 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_3320 | | GIY-YIG catalytic domain. | insig. | 33 | 49 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2127 | | DNA polymerase III alpha subunit (EC 2.7.7.7) | insig. | 39 | 35 |
| Paraburkholderia graminis OAS925 | ABIE53_003223 | | DNA polymerase-3 subunit epsilon | insig. | 31 | 41 |
| Pseudomonas syringae pv. syringae B728a | Psyr_4300 | | DNA polymerase III, epsilon subunit | insig. | 36 | 35 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4300 | | DNA polymerase III, epsilon subunit | insig. | 36 | 35 |
| Pseudomonas sp. SVBP6 | COO64_RS15410 | | PolC-type DNA polymerase III | insig. | 34 | 35 |
| Pseudomonas putida KT2440 | PP_4768 | | Exonuclease | insig. | 36 | 37 |
| Acidovorax sp. GW101-3H11 | Ac3H11_5015 | | DNA polymerase III alpha subunit (EC 2.7.7.7) | insig. | 39 | 30 |
| Fusobacterium nucleatum SB010 | HUW76_02840 | | PolC-type DNA polymerase III | no data | 31 | 39 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS25820 | | DNA polymerase III subunit epsilon | insig. | 33 | 35 |
| Pseudomonas sp. BP01 | JOY50_RS21815 | | PolC-type DNA polymerase III | insig. | 35 | 37 |
| Dinoroseobacter shibae DFL-12 | Dshi_3559 | | DNA polymerase III, epsilon subunit (RefSeq) | cofit | 38 | 35 |
| Pseudomonas fluorescens SBW25 | PFLU_RS26455 | | 3'-5' exonuclease | insig. | 34 | 35 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS26455 | | 3'-5' exonuclease | insig. | 34 | 35 |
| Synechococcus elongatus PCC 7942 | Synpcc7942_0251 | | Exonuclease | sig. | 34 | 33 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_1406 | | DNA polymerase III alpha subunit (EC 2.7.7.7) | no data | 34 | 35 |
| Shewanella loihica PV-4 | Shew_1871 | | DNA polymerase III, epsilon subunit (RefSeq) | no data | 33 | 34 |
| Pseudomonas simiae WCS417 | PS417_24520 | | DNA polymerase III subunit epsilon | sig. | 33 | 35 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_06275 | | DNA polymerase III subunit epsilon | insig. | 34 | 35 |
| Bifidobacterium breve UCC2003 | BBR_RS13650 | | 3'-5' exonuclease | insig. | 36 | 34 |
| Azospirillum sp. SherDot2 | MPMX19_01859 | | 3'-5' exonuclease DinG | insig. | 34 | 35 |
| Pseudomonas sp. DMC3 | GFF3922 | | DNA polymerase III PolC-type | cofit | 33 | 35 |
| Azospirillum brasilense Sp245 | AZOBR_RS14205 | | exonuclease | strong | 33 | 35 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_15515 | | DNA polymerase III subunit epsilon | insig. | 33 | 35 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5043 | | DNA polymerase III alpha subunit (EC 2.7.7.7) | no data | 33 | 35 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2733 | | DNA polymerase III alpha subunit (EC 2.7.7.7) | insig. | 33 | 35 |
| Pseudomonas sp. RS175 | PFR28_03828 | | DNA polymerase III PolC-type | no data | 33 | 35 |
| Xanthobacter sp. DMC5 | GFF1991 | | 3'-5' exonuclease DinG | insig. | 33 | 35 |
| Serratia liquefaciens MT49 | IAI46_09070 | | endonuclease | insig. | 30 | 42 |
| Shewanella sp. ANA-3 | Shewana3_2251 | | DNA polymerase III, epsilon subunit (RefSeq) | insig. | 31 | 36 |
| Shewanella oneidensis MR-1 | SO2245 | dnaQ-1 | DNA polymerase III, epsilon subunit (NCBI ptt file) | sig. | 31 | 35 |
| Pseudomonas sp. S08-1 | OH686_08770 | | DNA polymerase III alpha subunit | insig. | 34 | 35 |
| Bosea sp. OAE506 | ABIE41_RS16250 | | 3'-5' exonuclease | insig. | 32 | 35 |
| Magnetospirillum magneticum AMB-1 | AMB_RS07795 | | DNA polymerase III subunit epsilon | insig. | 33 | 35 |
| Erwinia amylovora T8 | OLJFJH_14770 | | excinuclease Cho | insig. | 32 | 42 |
| Klebsiella michiganensis M5al | BWI76_RS11710 | | nucleotide excision repair endonuclease | insig. | 29 | 42 |
| Pseudomonas putida KT2440 | PP_4141 | | DNA polymerase III subunit epsilon | no data | 32 | 35 |
| Caulobacter crescentus NA1000 | CCNA_00005 | | DNA polymerase III, epsilon chain | no data | 32 | 34 |
| Caulobacter crescentus NA1000 Δfur | CCNA_00005 | | DNA polymerase III, epsilon chain | no data | 32 | 34 |
| Mycobacterium tuberculosis H37Rv | Rv3711c | | Probable DNA polymerase III (epsilon subunit) DnaQ | insig. | 31 | 36 |
| Pseudomonas sp. S08-1 | OH686_03565 | | DNA polymerase III, epsilon subunit | no data | 31 | 35 |
| Rahnella sp. WP5 | EX31_RS05180 | | excinuclease Cho | insig. | 27 | 57 |
| Azospirillum brasilense Sp245 | AZOBR_RS01775 | | DNA polymerase III subunit epsilon | sig. | 30 | 36 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_2192 | | DNA polymerase III, epsilon subunit, Proteobacterial | no data | 30 | 34 |
| Pseudomonas sp. BP01 | JOY50_RS07075 | dnaQ | DNA polymerase III subunit epsilon | no data | 31 | 35 |
| Fusobacterium nucleatum SB010 | HUW76_06695 | | excinuclease ABC subunit UvrC | strong | 32 | 42 |
| Methylophilus sp. DMC18 | GFF1320 | | DNA polymerase III subunit epsilon | no data | 30 | 36 |
| Lysobacter sp. OAE881 | ABIE51_RS14095 | | DNA polymerase III subunit epsilon | no data | 28 | 37 |
| Pantoea sp. MT58 | IAI47_11065 | | excinuclease Cho | insig. | 30 | 42 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS11365 | | nuclease | insig. | 28 | 42 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS04150 | | excinuclease ABC subunit UvrC | insig. | 27 | 40 |
| Pantoea sp. MT58 | IAI47_15325 | | DNA polymerase III subunit epsilon | no data | 31 | 34 |
| Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS13650 | | DNA polymerase III subunit epsilon | no data | 32 | 34 |
| Pseudomonas fluorescens SBW25 | PFLU_RS12925 | | DNA polymerase III subunit epsilon | no data | 30 | 34 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS12925 | | DNA polymerase III subunit epsilon | no data | 30 | 34 |
| Rhodanobacter denitrificans MT42 | LRK55_RS16505 | | DNA polymerase III subunit epsilon | no data | 29 | 35 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS16780 | | DNA polymerase III subunit epsilon | no data | 29 | 35 |
| Rhodopseudomonas palustris CGA009 | TX73_001565 | | DNA polymerase III subunit epsilon | no data | 30 | 36 |
| Pseudomonas sp. RS175 | PFR28_01555 | | DNA polymerase III subunit epsilon | no data | 30 | 42 |
| Pseudomonas sp. SVBP6 | COO64_RS19265 | dnaQ | DNA polymerase III subunit epsilon | no data | 31 | 34 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_11380 | | DNA polymerase III subunit epsilon | no data | 31 | 39 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_24495 | | DNA polymerase III subunit epsilon | no data | 30 | 34 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_590 | | DNA polymerase III epsilon subunit (EC 2.7.7.7) | no data | 30 | 34 |
| Pseudomonas simiae WCS417 | PS417_12235 | | DNA polymerase III subunit epsilon | no data | 29 | 34 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_07985 | dnaQ | DNA polymerase III subunit epsilon | no data | 29 | 35 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0801 | uvrC | excinuclease ABC, C subunit (TIGR) | insig. | 25 | 41 |
| Azospirillum sp. SherDot2 | MPMX19_06127 | | DNA polymerase III subunit epsilon | insig. | 33 | 30 |
| Pseudomonas sp. DMC3 | GFF1025 | | DNA polymerase III subunit epsilon | no data | 30 | 34 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_23555 | | DNA polymerase III subunit epsilon | no data | 30 | 34 |
| Bacteroides stercoris CC31F | HMPREF1181_RS02095 | | excinuclease ABC subunit UvrC | insig. | 29 | 38 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1764 | | DNA polymerase III, epsilon subunit | no data | 30 | 34 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1764 | | DNA polymerase III, epsilon subunit | no data | 30 | 34 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS14230 | | DNA polymerase III subunit epsilon | no data | 30 | 39 |
| Rhodanobacter sp000427505 FW510-R12 | LRK53_RS12090 | | DNA polymerase III subunit epsilon | no data | 29 | 35 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS12830 | | 3'-5' exonuclease | insig. | 28 | 37 |
| Xanthobacter sp. DMC5 | GFF3739 | | DNA polymerase III subunit epsilon | no data | 31 | 37 |
| Pseudomonas stutzeri RCH2 | Psest_2074 | | DNA polymerase III, epsilon subunit, Proteobacterial | no data | 30 | 35 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4599 | | DNA polymerase III epsilon subunit (EC 2.7.7.7) | no data | 30 | 34 |
| Enterobacter asburiae PDN3 | EX28DRAFT_2679 | | DNA polymerase III, epsilon subunit, Proteobacterial | no data | 30 | 34 |
| Marinobacter adhaerens HP15 | HP15_1802 | | DNA polymerase 3, epsilon subunit | no data | 30 | 35 |
| Azospirillum sp. SherDot2 | MPMX19_02562 | | DNA polymerase III subunit epsilon | no data | 28 | 36 |
| Erwinia amylovora T8 | OLJFJH_18625 | | DNA polymerase III subunit epsilon | no data | 31 | 34 |
| Methanococcus maripaludis S2 | MMP_RS03810 | | excinuclease ABC subunit UvrC | insig. | 26 | 46 |
| Bosea sp. OAE506 | ABIE41_RS04640 | | DNA polymerase III subunit epsilon | insig. | 32 | 35 |