Homologs of Echvi_2564 from Echinicola vietnamensis KMM 6221, DSM 17526

DNA repair nuclease with dnaQ and GIY-YIG domains (from data)
Original annotation: exonuclease, DNA polymerase III, epsilon subunit family
SEED: DNA polymerase III epsilon subunit (EC 2.7.7.7)
KEGG: DNA polymerase III subunit epsilon

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2564 DNA repair nuclease with dnaQ and GIY-YIG domains (from data) strong 100 100
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07430 DNA repair nuclease with dnaQ and GIY-YIG domains (from data) strong 42 99
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS07560 DNA polymerase III subunit epsilon insig. 45 90
o Cellulophaga baltica 18 M666_RS00695 exonuclease domain-containing protein insig. 42 98
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13890 exonuclease domain-containing protein insig. 43 97
  Cellulophaga baltica 18 M666_RS17600 exonuclease domain-containing protein insig. 34 99
  Cupriavidus basilensis FW507-4G11 RR42_RS36200 ethanolamine utilization protein insig. 37 80
  Dechlorosoma suillum PS Dsui_0101 exonuclease, DNA polymerase III, epsilon subunit family cofit 37 80
  Marinobacter adhaerens HP15 HP15_3043 DNA polymerase III, epsilon subunit cofit 35 81
o Methylophilus sp. DMC18 GFF1760 3'-5' exonuclease DinG insig. 35 81
  Cellulophaga baltica 18 M666_RS14615 exonuclease domain-containing protein insig. 31 91
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03997 DNA polymerase-3 subunit epsilon insig. 36 69
  Paraburkholderia sabiae LMG 24235 QEN71_RS03705 exonuclease domain-containing protein insig. 36 69
  Burkholderia phytofirmans PsJN BPHYT_RS15265 DNA polymerase III subunit epsilon insig. 36 61
  Alteromonas macleodii MIT1002 MIT1002_03947 DNA polymerase III PolC-type insig. 52 37
  Mycobacterium tuberculosis H37Rv Rv2191 Conserved hypothetical protein insig. 29 77
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3320 GIY-YIG catalytic domain. insig. 33 49
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2127 DNA polymerase III alpha subunit (EC 2.7.7.7) insig. 39 35
  Paraburkholderia graminis OAS925 ABIE53_003223 DNA polymerase-3 subunit epsilon insig. 31 41
  Pseudomonas syringae pv. syringae B728a Psyr_4300 DNA polymerase III, epsilon subunit insig. 36 35
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4300 DNA polymerase III, epsilon subunit insig. 36 35
  Pseudomonas sp. SVBP6 COO64_RS15410 PolC-type DNA polymerase III insig. 34 35
  Pseudomonas putida KT2440 PP_4768 Exonuclease insig. 36 37
  Acidovorax sp. GW101-3H11 Ac3H11_5015 DNA polymerase III alpha subunit (EC 2.7.7.7) insig. 39 30
  Fusobacterium nucleatum SB010 HUW76_02840 PolC-type DNA polymerase III no data 31 39
  Cupriavidus basilensis FW507-4G11 RR42_RS25820 DNA polymerase III subunit epsilon insig. 33 35
  Pseudomonas sp. BP01 JOY50_RS21815 PolC-type DNA polymerase III insig. 35 37
  Dinoroseobacter shibae DFL-12 Dshi_3559 DNA polymerase III, epsilon subunit (RefSeq) cofit 38 35
  Pseudomonas fluorescens SBW25 PFLU_RS26455 3'-5' exonuclease insig. 34 35
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26455 3'-5' exonuclease insig. 34 35
  Synechococcus elongatus PCC 7942 Synpcc7942_0251 Exonuclease sig. 34 33
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1406 DNA polymerase III alpha subunit (EC 2.7.7.7) no data 34 35
  Shewanella loihica PV-4 Shew_1871 DNA polymerase III, epsilon subunit (RefSeq) no data 33 34
  Pseudomonas simiae WCS417 PS417_24520 DNA polymerase III subunit epsilon sig. 33 35
  Pseudomonas fluorescens FW300-N2E3 AO353_06275 DNA polymerase III subunit epsilon insig. 34 35
  Bifidobacterium breve UCC2003 BBR_RS13650 3'-5' exonuclease insig. 36 34
  Azospirillum sp. SherDot2 MPMX19_01859 3'-5' exonuclease DinG insig. 34 35
  Pseudomonas sp. DMC3 GFF3922 DNA polymerase III PolC-type cofit 33 35
  Azospirillum brasilense Sp245 AZOBR_RS14205 exonuclease strong 33 35
  Pseudomonas fluorescens FW300-N2C3 AO356_15515 DNA polymerase III subunit epsilon insig. 33 35
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5043 DNA polymerase III alpha subunit (EC 2.7.7.7) no data 33 35
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2733 DNA polymerase III alpha subunit (EC 2.7.7.7) insig. 33 35
  Pseudomonas sp. RS175 PFR28_03828 DNA polymerase III PolC-type no data 33 35
  Xanthobacter sp. DMC5 GFF1991 3'-5' exonuclease DinG insig. 33 35
  Serratia liquefaciens MT49 IAI46_09070 endonuclease insig. 30 42
  Shewanella sp. ANA-3 Shewana3_2251 DNA polymerase III, epsilon subunit (RefSeq) insig. 31 36
  Shewanella oneidensis MR-1 SO2245 dnaQ-1 DNA polymerase III, epsilon subunit (NCBI ptt file) sig. 31 35
  Pseudomonas sp. S08-1 OH686_08770 DNA polymerase III alpha subunit insig. 34 35
  Bosea sp. OAE506 ABIE41_RS16250 3'-5' exonuclease insig. 32 35
  Magnetospirillum magneticum AMB-1 AMB_RS07795 DNA polymerase III subunit epsilon insig. 33 35
  Erwinia amylovora T8 OLJFJH_14770 excinuclease Cho insig. 32 42
  Klebsiella michiganensis M5al BWI76_RS11710 nucleotide excision repair endonuclease insig. 29 42
  Pseudomonas putida KT2440 PP_4141 DNA polymerase III subunit epsilon no data 32 35
  Caulobacter crescentus NA1000 CCNA_00005 DNA polymerase III, epsilon chain no data 32 34
  Caulobacter crescentus NA1000 Δfur CCNA_00005 DNA polymerase III, epsilon chain no data 32 34
  Mycobacterium tuberculosis H37Rv Rv3711c Probable DNA polymerase III (epsilon subunit) DnaQ insig. 31 36
  Pseudomonas sp. S08-1 OH686_03565 DNA polymerase III, epsilon subunit no data 31 35
  Rahnella sp. WP5 EX31_RS05180 excinuclease Cho insig. 27 57
  Azospirillum brasilense Sp245 AZOBR_RS01775 DNA polymerase III subunit epsilon sig. 30 36
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2192 DNA polymerase III, epsilon subunit, Proteobacterial no data 30 34
  Pseudomonas sp. BP01 JOY50_RS07075 dnaQ DNA polymerase III subunit epsilon no data 31 35
  Fusobacterium nucleatum SB010 HUW76_06695 excinuclease ABC subunit UvrC strong 32 42
  Methylophilus sp. DMC18 GFF1320 DNA polymerase III subunit epsilon no data 30 36
  Lysobacter sp. OAE881 ABIE51_RS14095 DNA polymerase III subunit epsilon no data 28 37
  Pantoea sp. MT58 IAI47_11065 excinuclease Cho insig. 30 42
  Herbaspirillum seropedicae SmR1 HSERO_RS11365 nuclease insig. 28 42
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04150 excinuclease ABC subunit UvrC insig. 27 40
  Pantoea sp. MT58 IAI47_15325 DNA polymerase III subunit epsilon no data 31 34
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13650 DNA polymerase III subunit epsilon no data 32 34
  Pseudomonas fluorescens SBW25 PFLU_RS12925 DNA polymerase III subunit epsilon no data 30 34
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12925 DNA polymerase III subunit epsilon no data 30 34
  Rhodanobacter denitrificans MT42 LRK55_RS16505 DNA polymerase III subunit epsilon no data 29 35
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16780 DNA polymerase III subunit epsilon no data 29 35
  Rhodopseudomonas palustris CGA009 TX73_001565 DNA polymerase III subunit epsilon no data 30 36
  Pseudomonas sp. RS175 PFR28_01555 DNA polymerase III subunit epsilon no data 30 42
  Pseudomonas sp. SVBP6 COO64_RS19265 dnaQ DNA polymerase III subunit epsilon no data 31 34
  Vibrio cholerae E7946 ATCC 55056 CSW01_11380 DNA polymerase III subunit epsilon no data 31 39
  Pseudomonas fluorescens FW300-N2C3 AO356_24495 DNA polymerase III subunit epsilon no data 30 34
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_590 DNA polymerase III epsilon subunit (EC 2.7.7.7) no data 30 34
  Pseudomonas simiae WCS417 PS417_12235 DNA polymerase III subunit epsilon no data 29 34
  Rhodanobacter sp. FW510-T8 OKGIIK_07985 dnaQ DNA polymerase III subunit epsilon no data 29 35
  Desulfovibrio vulgaris Hildenborough JW710 DVU0801 uvrC excinuclease ABC, C subunit (TIGR) insig. 25 41
  Azospirillum sp. SherDot2 MPMX19_06127 DNA polymerase III subunit epsilon insig. 33 30
  Pseudomonas sp. DMC3 GFF1025 DNA polymerase III subunit epsilon no data 30 34
  Pseudomonas fluorescens FW300-N2E3 AO353_23555 DNA polymerase III subunit epsilon no data 30 34
  Bacteroides stercoris CC31F HMPREF1181_RS02095 excinuclease ABC subunit UvrC insig. 29 38
  Pseudomonas syringae pv. syringae B728a Psyr_1764 DNA polymerase III, epsilon subunit no data 30 34
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1764 DNA polymerase III, epsilon subunit no data 30 34
  Ralstonia sp. UNC404CL21Col ABZR87_RS14230 DNA polymerase III subunit epsilon no data 30 39
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12090 DNA polymerase III subunit epsilon no data 29 35
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12830 3'-5' exonuclease insig. 28 37
  Xanthobacter sp. DMC5 GFF3739 DNA polymerase III subunit epsilon no data 31 37
  Pseudomonas stutzeri RCH2 Psest_2074 DNA polymerase III, epsilon subunit, Proteobacterial no data 30 35
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4599 DNA polymerase III epsilon subunit (EC 2.7.7.7) no data 30 34
  Enterobacter asburiae PDN3 EX28DRAFT_2679 DNA polymerase III, epsilon subunit, Proteobacterial no data 30 34
  Marinobacter adhaerens HP15 HP15_1802 DNA polymerase 3, epsilon subunit no data 30 35
  Azospirillum sp. SherDot2 MPMX19_02562 DNA polymerase III subunit epsilon no data 28 36
  Erwinia amylovora T8 OLJFJH_18625 DNA polymerase III subunit epsilon no data 31 34
  Methanococcus maripaludis S2 MMP_RS03810 excinuclease ABC subunit UvrC insig. 26 46
  Bosea sp. OAE506 ABIE41_RS04640 DNA polymerase III subunit epsilon insig. 32 35