Homologs of ycaJ from Escherichia coli BW25113

ycaJ: recombination protein (NCBI)
SEED: FIG065221: Holliday junction DNA helicase
KEGG: putative ATPase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
o Escherichia coli BL21 ECD_00896 recombination intermediate processing DNA-dependent ATPase cofit 100 100
o Escherichia fergusonii Becca EFB2_03169 Replication-associated recombination protein A insig. 100 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02776 Replication-associated recombination protein A insig. 100 100
o Escherichia coli Nissle 1917 ECOLIN_RS04745 replication-associated recombination protein RarA insig. 100 100
  Escherichia coli BW25113 b0892 ycaJ recombination protein (NCBI) strong 100 100
o Escherichia coli ECRC100 OKFHMN_05560 rarA replication-associated recombination protein RarA cofit 100 100
o Escherichia coli ECRC101 MCAODC_24950 rarA replication-associated recombination protein RarA insig. 100 100
o Escherichia coli ECRC102 NIAGMN_03280 rarA replication-associated recombination protein RarA insig. 100 100
o Escherichia coli ECRC98 JDDGAC_09370 rarA replication-associated recombination protein RarA insig. 100 100
o Escherichia coli ECRC99 KEDOAH_22175 rarA replication-associated recombination protein RarA no data 100 100
o Escherichia coli ECOR27 NOLOHH_22130 rarA replication-associated recombination protein RarA insig. 100 100
o Escherichia coli ECOR38 HEPCGN_22950 rarA replication-associated recombination protein RarA insig. 100 100
o Escherichia coli ECRC62 BNILDI_20385 rarA replication-associated recombination protein RarA insig. 99 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4896 FIG065221: Holliday junction DNA helicase insig. 97 100
o Klebsiella pneumoniae MKP103 KDGMDA_17905 replication-associated recombination protein RarA sig. 96 100
o Enterobacter asburiae PDN3 EX28DRAFT_2040 ATPase related to the helicase subunit of the Holliday junction resolvase insig. 95 100
o Enterobacter sp. TBS_079 MPMX20_01554 Replication-associated recombination protein A insig. 96 100
o Klebsiella michiganensis M5al BWI76_RS09670 recombination factor protein RarA strong 95 100
o Pantoea sp. MT58 IAI47_12900 replication-associated recombination protein A insig. 89 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS04430 replication-associated recombination protein A cofit 89 100
o Dickeya dianthicola 67-19 HGI48_RS09620 replication-associated recombination protein A insig. 88 100
o Dickeya dianthicola ME23 DZA65_RS09930 replication-associated recombination protein A insig. 88 100
o Pectobacterium carotovorum WPP14 HER17_RS12345 replication-associated recombination protein A cofit 88 100
o Dickeya dadantii 3937 DDA3937_RS09605 replication-associated recombination protein A insig. 88 100
o Serratia liquefaciens MT49 IAI46_08570 replication-associated recombination protein A insig. 88 100
o Erwinia amylovora T8 OLJFJH_16170 recombination factor protein RarA insig. 87 100
o Rahnella sp. WP5 EX31_RS18515 replication-associated recombination protein A insig. 87 100
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_20230 Replication-associated recombination protein A cofit 86 100
o Erwinia tracheiphila SCR3 LU632_RS09755 replication-associated recombination protein A insig. 86 96
o Vibrio cholerae E7946 ATCC 55056 CSW01_05630 replication-associated recombination protein A strong 74 100
o Shewanella sp. ANA-3 Shewana3_2052 recombination factor protein RarA (RefSeq) insig. 68 100
o Shewanella oneidensis MR-1 SO2308 ATPase, AAA family (NCBI ptt file) strong 67 100
o Shewanella loihica PV-4 Shew_2022 recombination factor protein RarA (RefSeq) insig. 66 100
o Shewanella amazonensis SB2B Sama_1774 recombination factor protein RarA (RefSeq) sig. 66 99
o Pseudomonas sp. SVBP6 COO64_RS24170 replication-associated recombination protein A insig. 61 98
o Alteromonas macleodii MIT1002 MIT1002_02178 Replication-associated recombination protein A insig. 62 97
o Pseudomonas aeruginosa PA14 IKLFDK_13115 recombination factor protein RarA insig. 61 98
o Pseudomonas segetis P6 MPMX49_02534 Replication-associated recombination protein A insig. 62 97
o Pseudomonas sp. BP01 JOY50_RS06525 replication-associated recombination protein A cofit 61 98
o Marinobacter adhaerens HP15 HP15_1817 recombination factor protein RarA strong 60 97
o Pseudomonas putida KT2440 PP_4002 DNA-dependent ATPase required for recombination strong 60 98
o Pseudomonas fluorescens FW300-N2C3 AO356_22185 recombination factor protein RarA cofit 61 97
o Pseudomonas stutzeri RCH2 Psest_2034 ATPase related to the helicase subunit of the Holliday junction resolvase strong 60 97
o Pseudomonas sp. RS175 PFR28_02606 Replication-associated recombination protein A insig. 61 97
o Pseudomonas sp. S08-1 OH686_00270 Replication-associated recombination protein RarA cofit 62 97
o Pseudomonas syringae pv. syringae B728a Psyr_3177 Recombination protein MgsA insig. 61 97
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3177 Recombination protein MgsA insig. 61 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_299 FIG065221: Holliday junction DNA helicase strong 61 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4062 FIG065221: Holliday junction DNA helicase sig. 61 97
o Pseudomonas fluorescens FW300-N2E3 AO353_27640 recombination factor protein RarA strong 60 97
o Pseudomonas fluorescens SBW25 PFLU_RS18520 replication-associated recombination protein A insig. 60 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS18520 replication-associated recombination protein A insig. 60 98
o Kangiella aquimarina DSM 16071 B158DRAFT_1819 ATPase related to the helicase subunit of the Holliday junction resolvase strong 57 97
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2653 FIG065221: Holliday junction DNA helicase sig. 60 97
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03623 Replication-associated recombination protein A cofit 60 98
o Pseudomonas sp. DMC3 GFF1532 Replication-associated recombination protein A insig. 60 97
o Pseudomonas simiae WCS417 PS417_16480 recombination factor protein RarA strong 60 98
o Cupriavidus basilensis FW507-4G11 RR42_RS04355 recombination factor protein RarA insig. 57 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS16030 replication-associated recombination protein A insig. 55 96
o Paraburkholderia graminis OAS925 ABIE53_001292 putative ATPase strong 55 96
o Burkholderia phytofirmans PsJN BPHYT_RS05100 ATPase AAA insig. 55 96
o Herbaspirillum seropedicae SmR1 HSERO_RS09515 ATPase AAA insig. 55 97
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS04145 replication-associated recombination protein A insig. 55 96
o Ralstonia solanacearum UW163 UW163_RS09525 replication-associated recombination protein A insig. 55 96
o Ralstonia solanacearum PSI07 RPSI07_RS13205 replication-associated recombination protein A insig. 54 96
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS01825 replication-associated recombination protein A strong 55 92
o Paraburkholderia sabiae LMG 24235 QEN71_RS03415 replication-associated recombination protein A insig. 55 95
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00180 Recombination protein MgsA insig. 55 96
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2744.1 FIG065221: Holliday junction DNA helicase insig. 54 94
o Ralstonia solanacearum GMI1000 RS_RS11735 replication-associated recombination protein A insig. 54 96
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS11700 replication-associated recombination protein A insig. 53 94
o Variovorax sp. OAS795 ABID97_RS07835 replication-associated recombination protein A sig. 55 95
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS17320 replication-associated recombination protein A insig. 53 94
o Variovorax sp. SCN45 GFF6034 Replication-associated recombination protein RarA insig. 54 95
o Methylophilus sp. DMC18 GFF351 Replication-associated recombination protein A insig. 54 95
o Acidovorax sp. GW101-3H11 Ac3H11_1696 FIG065221: Holliday junction DNA helicase insig. 53 94
o Rhodanobacter sp. FW510-T8 OKGIIK_07580 rarA recombination factor protein RarA insig. 53 94
o Rhodanobacter denitrificans MT42 LRK55_RS17545 replication-associated recombination protein A strong 52 94
o Castellaniella sp019104865 MT123 ABCV34_RS07220 replication-associated recombination protein A insig. 54 96
o Lysobacter sp. OAE881 ABIE51_RS11445 replication-associated recombination protein A cofit 54 94
o Dechlorosoma suillum PS Dsui_1694 AAA ATPase insig. 53 96
  Burkholderia phytofirmans PsJN BPHYT_RS00485 ATPase, AAA family insig. 49 96
o Agrobacterium fabrum C58 Atu1914 ATPase, AAA family protein insig. 50 95
o Xanthobacter sp. DMC5 GFF1351 Replication-associated recombination protein A insig. 47 97
o Sinorhizobium meliloti 1021 SMc01279 recombination factor protein RarA sig. 48 96
o Rhizobium sp. OAE497 ABIE40_RS08045 replication-associated recombination protein A insig. 48 95
o Azospirillum sp. SherDot2 MPMX19_01528 Replication-associated recombination protein A insig. 46 96
o Phaeobacter inhibens DSM 17395 PGA1_c01930 replication-associated recombination protein A strong 46 94
o Dinoroseobacter shibae DFL-12 Dshi_0313 AAA ATPase central domain protein (RefSeq) insig. 47 96
o Azospirillum brasilense Sp245 AZOBR_RS06885 ATPase AAA insig. 47 95
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07890 replication-associated recombination protein A insig. 49 94
o Rhodopseudomonas palustris CGA009 TX73_016655 replication-associated recombination protein A insig. 46 96
o Bacteroides ovatus ATCC 8483 BACOVA_03971 ATPase, AAA family insig. 46 94
o Rhodospirillum rubrum S1H Rru_A2660 AAA ATPase, central region (NCBI) cofit 44 95
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF777 FIG065221: Holliday junction DNA helicase cofit 55 79
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02215 AAA family ATPase insig. 46 93
o Sphingobium sp. HT1-2 GFF39 Replication-associated recombination protein RarA cofit 46 94
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22400 AAA family ATPase insig. 47 93
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06440 replication-associated recombination protein A sig. 46 94
o Caulobacter crescentus NA1000 CCNA_01342 ATPase, AAA family insig. 48 94