Fitness data for Xcc-8004.3731.1 in Xanthomonas campestris pv. campestris strain 8004

Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV)
SEED: Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV)
KEGG: type III secretion protein SctV

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -4.4 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -3.4 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -1.9 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.7 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -1.7 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.7 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.6 -1.5 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -1.6 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.5 -1.1 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -1.5 -2.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -1.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.2 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.0 -1.2 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -1.0 -1.8 compare
in planta xylem Xylemvessel barcodes T0L2P4 +0.9 +1.1 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) +1.0 +2.4 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) +1.1 +2.1 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) +1.2 +1.2 compare
in planta xylem Xylemvessel barcodes T0L1P4 +1.4 +1.0 compare
in planta 1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) +1.8 +1.8 compare