Fitness data for ABZR87_RS20945 in Ralstonia sp. UNC404CL21Col

DNA-3-methyladenine glycosylase I
SEED: DNA-3-methyladenine glycosylase (EC 3.2.2.20)
KEGG: DNA-3-methyladenine glycosylase I

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
nitrogen source nitrogen source nitrate 20mM -2.7 -2.9 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.3 -1.1 compare
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB -1.3 -1.4 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.3 -1.0 compare
rhizosphere rhizosphere sample 3; outgrowth in LB -1.0 -1.1 compare
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.0 -0.8 compare
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -1.0 -1.5 compare
phage Ra3_0.1 -0.9 -1.8 compare
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.8 -0.5 compare
soil soil EcoFAB sample 2; outgrowth in LB +0.7 +1.0 compare
root root EcoFAB sample 2; outgrowth in LB +0.7 +1.4 compare
soil soil sample 1; outgrowth in LB +0.8 +1.7 compare
carbon source D-Galactose (C) +0.8 +1.8 compare
carbon source Protocatechuic Acid (C) +0.8 +2.2 compare
soil soil sample 4; outgrowth in LB +0.8 +2.5 compare
carbon source Lauric (C) +0.9 +2.0 compare
carbon source Trans-2-methyl-2-butenoic (C) +1.0 +1.5 compare
rhizosphere rhizosphere sample 7; outgrowth in LB +1.1 +1.8 compare
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB +1.2 +1.9 compare
phage Ra1_0.1 +1.4 +2.6 compare