Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_21260
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.5
stress	methylglyoxal 0.032 vol%	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.4
stress	Gentamicin 0.008 mg/ml	-0.4
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.3
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.3
temperature	LB_noSalt 30C	-0.3
phage	P. simiae Grant Run MOI 10	-0.3
stress	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 2	-0.3
carbon source	L-Valine (C)	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3
stress	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 2	-0.3
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.3
stress	Choline chloride 300 mM	+0.3
supernatant control	Vogels_fungal_media 0.1X	+0.3
soil	soil sample 7; outgrowth in LB	+0.3
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.3
phage	P. simiae Grant Run MOI 0.1	+0.3
motility_chemotaxis	Method=Plug_approach; Chemical=None; Chemical_conc=0mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days	+0.4
phage moi 100	Time6-phageFRS	+0.4
seeds	Growth on radish seeds for 72 hours	+0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.5
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