Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_10255
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7
seeds	Growth on radish seeds for 72 hours	-0.6
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.6
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6
motility	inner cut, LB soft agar motility assay	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.6
phage	P. simiae Grant Run MOI 10	-0.5
soil	soil sample 3; outgrowth in LB	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.5
nophagecontrol	Only library	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.5
stress	R2A with Fusaric 120 ug/mL	-0.5
ecofab	LB 0.5x in EcoFAB_3.5mL	-0.5
ecofab	LB in EcoFAB_3.5mL	-0.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5
seeds	Growth on radish seeds for 24 hours	+0.5
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	+0.5
seeds	Growth on radish seeds for 72 hours	+0.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.6
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.7
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