Fitness for 1 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS30815
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	-0.9
nutrient	L-Serine	-0.9
carbon source	D-Glucose (C)	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7
nutrient	casaminos	-0.6
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+0.6
phage	36hr PHYTO6 MOI 10	+0.6
phage	24hr PHYTO6 MOI 1	+0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.6
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	+0.6
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	+0.6
replicable vector efficiency	Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50	+0.6
motility	outer cut, LB soft agar motility assay	+0.6
motility	inner cut, LB soft agar motility assay	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.7
phage	36hr PHYTO8 MOI 10	+0.7
pH	LB, pH4	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.7
nitrogen source	L-Phenylalanine (N)	+0.7
phage	24hr PHYTO6 MOI 10	+0.7
phage	36hr PHYTO3 MOI 1	+0.7
phage	24hr PHYTO2 MOI 0.1	+0.7
nitrogen source	L-Proline (N)	+0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.8
supernatant control	Vogels_fungal_media; pH 5.5	+0.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB	+0.9
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	+0.9
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9
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