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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS07000 and RR42_RS07005 are separated by 291 nucleotides
RR42_RS07005 and RR42_RS07010 are separated by 2 nucleotides
RR42_RS07010 and RR42_RS07015 are separated by 3 nucleotides
RR42_RS07015 and RR42_RS07020 are separated by 216 nucleotides
RR42_RS07000: RR42_RS07000 - hypothetical protein, at 1,504,578 to 1,504,781
_RS07000
RR42_RS07005: RR42_RS07005 - ATP synthase I, at 1,505,073 to 1,505,732
_RS07005
RR42_RS07010: RR42_RS07010 - hypothetical protein, at 1,505,735 to 1,506,070
_RS07010
RR42_RS07015: RR42_RS07015 - hypothetical protein, at 1,506,074 to 1,506,385
_RS07015
RR42_RS07020: RR42_RS07020 - hypothetical protein, at 1,506,602 to 1,507,156
_RS07020
Group
Condition
RR42
_RS07000
RR42
_RS07005
RR42
_RS07010
RR42
_RS07015
RR42
_RS07020
carbon source
Azelaic (C)
-0.3
-0.3
-0.4
-0.7
+0.1
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.6
-0.1
+0.3
-1.0
-0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.3
-0.7
+0.3
-0.6
-0.7
carbon source
Octanoic (C)
-0.1
-0.2
-0.7
-0.1
-0.0
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.2
-0.2
-0.1
-0.4
-0.5
stress
R2A with Chloride 300 mM
+0.1
-0.2
-0.5
-0.1
-0.2
stress
R2A with Cobalt chloride 0.5 mM
-0.1
+0.0
+0.2
-0.7
-0.2
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
-0.1
-0.1
-0.1
+0.3
-0.6
stress
R2A with Lomefloxacin 0.001 mM
-0.2
+0.2
-0.1
+0.3
-0.7
nitrogen source
L-Leucine (N)
+0.1
+0.2
-0.6
-0.5
+0.3
stress
R2A with nitrate 200 mM
-0.2
-0.2
-0.2
+0.5
-0.2
carbon source
a-Ketoglutaric (C)
-0.6
-0.1
-0.2
+0.4
+0.1
stress
R2A with Lomefloxacin 0.00075 mM
-0.2
+0.1
+0.3
-0.3
-0.3
carbon source
Carbon source D,L-Lactate 10 mM
-0.5
+0.3
+0.2
-0.1
-0.2
carbon source
Trisodium citrate (C)
-0.4
-0.2
+0.4
-0.0
+0.1
stress
R2A with Bacitracin 0.5 mg/ml
+0.1
+0.1
+0.4
-0.5
-0.3
stress
R2A with Vancomycin 0.5 mg/ml
+0.1
+0.0
+0.5
-0.0
-0.7
nitrogen source
L-Asparagine (N)
+0.3
-0.0
-0.3
-0.3
+0.3
carbon source
Carbon source Phenylacetic 2.5 mM
-0.4
+0.2
+0.4
+0.0
-0.3
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.2
-0.5
+0.6
+0.0
+0.1
carbon source
Protocatechuic Acid (C)
-0.2
-0.3
+0.2
+0.1
+0.4
carbon source
succinate (C)
+0.4
+0.2
-0.4
-0.1
+0.3
carbon source
L-Asparagine (C)
+0.1
+0.1
-0.5
+0.5
+0.2
carbon source
L-Alanine (C)
+0.1
+0.2
-0.4
+0.3
+0.4
r2a
R2A
+0.4
-0.1
+0.3
+0.2
-0.2
stress
R2A with Vancomycin 0.5 mg/ml
-0.3
-0.0
+0.3
+0.7
+0.1
stress
R2A with Chlorite 4 mM
-0.1
-0.2
+0.5
+0.4
+0.2
stress
R2A with Zinc 0.1 mM
+0.3
+0.1
-0.1
+0.3
+0.4
carbon source
adipate (C)
+0.2
+0.3
+0.1
+0.5
-0.1
stress
R2A with Thallium(I) acetate 0.001 mg/ml
+0.1
+0.3
+0.4
+0.5
+0.1
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