Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

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500 ntPsyr_3036 and Psyr_3037 are separated by 22 nucleotidesPsyr_3037 and Psyr_3038 are separated by 113 nucleotidesPsyr_3038 and Psyr_3039 are separated by 153 nucleotidesPsyr_3039 and Psyr_3040 are separated by 93 nucleotides Psyr_3036: Psyr_3036 - transcriptional regulator, TetR family, at 3,636,310 to 3,636,960 _3036 Psyr_3037: Psyr_3037 - membrane protein, putative, at 3,636,983 to 3,638,344 _3037 Psyr_3038: Psyr_3038 - conserved hypothetical protein, at 3,638,458 to 3,638,712 _3038 Psyr_3039: Psyr_3039 - protein of unknown function DUF883, at 3,638,866 to 3,639,183 _3039 Psyr_3040: Psyr_3040 - conserved hypothetical protein, at 3,639,277 to 3,639,618 _3040
Group Condition Psyr_3036 Psyr_3037 Psyr_3038 Psyr_3039 Psyr_3040
stress KB with Avocadene 10 mM -0.4 +0.1 N.D. -0.9 -0.3
in planta apoplastic; Pepper -0.5 +0.3 N.D. -0.9 -0.3
carbon source Citric Acid (C) +0.3 +0.2 N.D. -0.6 -1.2
stress KB with Erythromycin 25 ug/ml +0.3 +0.2 N.D. -0.9 -0.5
in planta apoplastic, sonication recovery; Green bean -0.7 -0.2 N.D. -0.6 +0.7
stress KB with Dimethyl Sulfoxide 1 vol% +0.5 +0.3 N.D. -1.2 -0.4
carbon source Fumaric (C) +0.4 +0.2 N.D. -0.5 -0.9
stress KB with Trimethoprim 125 ug/ml +0.1 +0.3 N.D. -0.6 -0.7
stress KB with Mitomycin C 0.625 ug/ml +0.5 -0.2 N.D. +0.6 -1.6
in planta apoplastic, sonication recovery; Green bean -0.5 -0.1 N.D. -0.7 +0.7
stress KB with Nitrofurantoin 125 ug/ml +0.4 +0.3 N.D. -0.8 -0.5
stress KB with Fusaric 250 ug/ml -0.1 +0.1 N.D. +0.5 -1.0
in planta apoplastic, grinding recovery; Green bean -0.2 +0.1 N.D. -1.1 +0.7
stress KB with Benzalkonium Chloride 6.25 ug/ml +0.2 -0.1 N.D. +0.6 -1.2
in planta apoplastic; Lima bean -1.1 +0.1 N.D. +0.3 +0.3
in planta apoplastic; Lima bean -0.7 +0.5 N.D. -0.3 +0.2
in planta epiphytic; Lima bean -1.0 -0.0 N.D. +0.5 +0.2
stress KB with Cotarnine Chloride 10 mM +0.2 -0.2 N.D. +0.7 -0.8
stress KB with Nalidixic 12.5 ug/ml +0.6 +0.3 N.D. +0.2 -1.1
stress KB with Isovanillin 10 mM -0.7 +0.3 N.D. +0.7 -0.3
stress KB with Prenyletin 10 mM -1.0 +0.2 N.D. +0.3 +0.7
stress KB with Acriflavine 7.75 ug/ml +0.8 +0.1 N.D. -0.6 -0.2
in planta Green bean; epiphytic -0.4 +0.3 N.D. +0.8 -0.5
carbon source L-Proline (C) -0.7 +0.0 N.D. +0.9 +0.3
aphid library passed through aphids in food, 72 hours +0.9 -0.2 N.D. +0.3 -0.4
carbon source Glycerol (C) +0.3 +0.3 N.D. +0.7 -0.3
carbon source D-Mannose (C) +0.3 +0.2 N.D. +1.2 -0.6
in planta apoplastic, chopping recovery; Green bean -0.0 -0.4 N.D. +1.5 +0.1
in planta apoplastic; Pepper +0.1 -0.0 N.D. +0.6 +1.2
in planta apoplastic; Pepper +0.0 +0.1 N.D. +0.7 +1.2
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