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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2853 and Psyr_2854 are separated by 311 nucleotides
Psyr_2854 and Psyr_2855 are separated by 23 nucleotides
Psyr_2855 and Psyr_2856 are separated by 158 nucleotides
Psyr_2856 and Psyr_2857 are separated by 187 nucleotides
Psyr_2853: Psyr_2853 - CDS, at 3,424,942 to 3,425,439
_2853
Psyr_2854: Psyr_2854 - conserved hypothetical protein, at 3,425,751 to 3,426,734
_2854
Psyr_2855: Psyr_2855 - methionine synthase (B12-independent), at 3,426,758 to 3,427,789
_2855
Psyr_2856: Psyr_2856 - Chitin-binding, domain 3, at 3,427,948 to 3,428,691
_2856
Psyr_2857: Psyr_2857 - conserved hypothetical protein, at 3,428,879 to 3,429,256
_2857
Group
Condition
Psyr
_2853
Psyr
_2854
Psyr
_2855
Psyr
_2856
Psyr
_2857
stress
KB with Fusaric 250 ug/ml
-0.5
-2.4
-1.6
-0.2
-0.3
stress
KB with Fusaric 250 ug/ml
-0.2
-1.5
-2.9
-0.3
-0.0
stress
KB with Dimethyl Sulfoxide 1 vol%
-0.7
-1.5
-1.9
-0.2
-0.2
kb
KB
-0.3
-1.8
-1.7
-0.3
+0.0
stress
KB with Nitrofurantoin 125 ug/ml
-0.4
-1.5
-2.0
-0.0
-0.0
stress
KB with Mitomycin C 0.625 ug/ml
-0.7
-1.9
-0.9
-0.4
+0.2
stress
KB with Quercetin 360 ug/ml
-0.4
-1.8
-1.2
-0.2
-0.1
stress
KB with Ampicillin 15.6 ug/ml
-0.3
-1.8
-1.5
-0.1
+0.1
stress
KB with capsaicin 0.125 mg/ml
-0.2
-1.2
-1.8
-0.0
-0.4
stress
KB with Trimethoprim 125 ug/ml
-0.2
-2.1
-1.5
-0.3
+0.6
stress
KB with Ferulic Acid 180 ug/ml
-0.1
-1.9
-1.4
+0.1
-0.1
stress
KB with Carnitine (Dl) Hydrochloride 10 mM
-0.2
-1.5
-1.5
-0.2
+0.0
kb
KB
-0.3
-1.8
-1.3
+0.0
-0.1
stress
KB with Novobiocin 250 ug/ml
-0.2
-1.3
-0.5
-0.5
-0.8
stress
KB with Xanthyletin 10 mM
-0.5
-1.1
-1.3
-0.1
-0.2
stress
KB with Nitrofurantoin 0.25 mg/ml
-0.3
-1.6
-1.5
+0.0
+0.1
stress
KB with Khayasin C 10 mM
-0.4
-1.0
-1.6
-0.2
-0.0
stress
KB with Cimicifugoside H1 10 mM
-0.3
-1.4
-1.0
-0.2
-0.4
stress
KB with Anisodamine Hydrobromide () 10 mM
-0.1
-1.2
-1.8
-0.2
+0.2
stress
KB with Rotenone 0.125 mg/ml
-0.3
-1.2
-1.3
-0.1
-0.2
stress
KB with Aristolochic Acid 10 mM
-0.1
-1.4
-1.2
-0.4
+0.0
stress
KB with Myricetin 10 mM
-0.3
-1.1
-0.9
-0.4
-0.5
stress
KB with Phloretin 250 ug/ml
-0.2
-1.8
-1.5
-0.0
+0.3
stress
KB with capsaicin 0.25 mg/ml
-0.1
-1.7
-0.8
+0.1
-0.5
carbon source
Citric Acid (C)
-0.1
-1.3
-1.5
-0.1
-0.1
in planta
apoplastic, sonication recovery; Green bean
-0.6
-1.1
-1.6
+0.4
+0.1
stress
KB with Carbenicillin 250 ug/ml
-0.2
-1.6
-1.2
+0.0
+0.1
stress
KB with Acridine orange 62.5 ug/ml
-0.7
-1.0
-1.4
+0.0
+0.2
stress
KB with Brucine 10 mM
-0.3
-1.1
-1.2
-0.3
+0.2
in planta
apoplastic, sonication recovery; Green bean
-0.8
-0.4
-1.5
+0.3
+0.1
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