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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1567 and Psyr_1568 are separated by 4 nucleotides
Psyr_1568 and Psyr_1569 are separated by 105 nucleotides
Psyr_1569 and Psyr_1570 are separated by 66 nucleotides
Psyr_1570 and Psyr_1571 overlap by 4 nucleotides
Psyr_1567: Psyr_1567 - Uncharacterized conserved protein UCP006173, at 1,763,312 to 1,763,761
_1567
Psyr_1568: Psyr_1568 - conserved hypothetical protein, at 1,763,766 to 1,764,146
_1568
Psyr_1569: Psyr_1569 - conserved hypothetical protein, at 1,764,252 to 1,764,752
_1569
Psyr_1570: Psyr_1570 - Copper resistance B precursor, at 1,764,819 to 1,765,727
_1570
Psyr_1571: Psyr_1571 - Twin-arginine translocation pathway signal:Copper-resistance protein CopA, at 1,765,724 to 1,767,502
_1571
Group
Condition
Psyr
_1567
Psyr
_1568
Psyr
_1569
Psyr
_1570
Psyr
_1571
stress
KB with Irigenin 10 mM
-0.5
N.D.
+0.0
-0.4
+0.0
in planta
apoplastic; Lima bean
-1.0
N.D.
+0.1
+0.3
-0.1
stress
KB with Leucodin 10 mM
-0.4
N.D.
+0.1
-0.4
+0.1
in planta
epiphytic; Green bean
+0.2
N.D.
+0.3
-0.7
-0.0
stress
KB with Anisodamine Hydrobromide () 10 mM
-0.5
N.D.
-0.1
+0.5
+0.0
carbon source
Glycerol (C)
+0.4
N.D.
+0.1
-0.5
+0.0
carbon source
D-Mannose (C)
+0.7
N.D.
+0.0
-0.3
-0.2
in planta
epiphytic; Green bean
+0.6
N.D.
+0.4
-0.6
-0.1
in planta
apoplastic, chopping recovery; Green bean
-0.6
N.D.
+0.0
+0.9
+0.0
in planta
apoplastic, grinding recovery; Green bean
+0.8
N.D.
+0.2
-0.4
+0.1
stress
KB with Mitomycin C 0.625 ug/ml
+0.3
N.D.
-0.2
+0.3
+0.4
stress
KB with Harmalol 10 mM
+0.6
N.D.
+0.2
+0.1
-0.0
in planta
apoplastic; Pepper
+0.7
N.D.
+0.2
-0.0
+0.0
in planta
Green bean; epiphytic
+0.1
N.D.
-0.0
+0.7
+0.1
in planta
apoplastic; Lima bean
+0.4
N.D.
+0.2
+0.4
-0.0
stress
KB with Palmatine chloride 10 mM
+0.4
N.D.
+0.3
+0.1
+0.2
stress
KB with Avocatin A 10 mM
+0.5
N.D.
+0.3
+0.1
+0.1
stress
KB with Chloramphenicol 12.5 ug/ml
+0.2
N.D.
+0.2
+0.5
+0.0
stress
KB with Avocadyne 10 mM
+0.2
N.D.
+0.3
+0.4
+0.1
stress
KB with Acriflavine 7.75 ug/ml
+0.6
N.D.
+0.2
+0.3
+0.1
stress
KB with Fusaric 250 ug/ml
+0.3
N.D.
-0.0
+0.7
+0.1
stress
KB with Fusaric 250 ug/ml
+0.4
N.D.
+0.0
+0.5
+0.2
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.3
N.D.
-0.3
+0.9
+0.3
stress
KB with Ampicillin 15.6 ug/ml
+0.4
N.D.
+0.2
+0.5
+0.1
stress
KB with Plumbagin 10 mM
+0.5
N.D.
+0.2
+0.5
+0.1
stress
KB with Nonanoic 10 mM
+0.7
N.D.
+0.2
+0.3
+0.1
stress
KB with Acridine orange 62.5 ug/ml
+0.1
N.D.
-0.1
+1.1
+0.3
stress
KB with Carbenicillin 250 ug/ml
+0.5
N.D.
+0.2
+0.7
+0.1
in planta
apoplastic, sonication recovery; Green bean
+1.6
N.D.
+0.0
+0.1
-0.1
in planta
apoplastic, sonication recovery; Green bean
+1.7
N.D.
-0.0
+0.4
+0.0
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