Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

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500 ntPsyr_1213 and Psyr_1214 overlap by 4 nucleotidesPsyr_1214 and Psyr_1215 are separated by 33 nucleotidesPsyr_1215 and Psyr_1216 overlap by 1 nucleotidesPsyr_1216 and Psyr_1217 are separated by 166 nucleotides Psyr_1213: Psyr_1213 - type III secretion cytoplasmic ATPase HrcN, at 1,369,057 to 1,370,406 _1213 Psyr_1214: Psyr_1214 - type III secretion protein HrpQ, at 1,370,403 to 1,371,377 _1214 Psyr_1215: Psyr_1215 - Type III secretion protein HrcV, at 1,371,411 to 1,373,498 _1215 Psyr_1216: Psyr_1216 - type III secretion outer membrane protein PopN, at 1,373,498 to 1,374,679 _1216 Psyr_1217: Psyr_1217 - Sigma-70 region 2:Sigma-70 region 4, at 1,374,846 to 1,375,400 _1217
Group Condition Psyr_1213 Psyr_1214 Psyr_1215 Psyr_1216 Psyr_1217
in planta apoplastic; Pepper -2.4 N.D. -2.2 -2.4 -3.8
in planta apoplastic; Pepper -2.9 N.D. -2.3 -1.9 -3.0
in planta apoplastic, grinding recovery; Green bean -1.9 N.D. -1.1 -1.4 -4.8
in planta apoplastic; Pepper -1.7 N.D. -2.1 -2.2 -3.1
in planta apoplastic; Lima bean -3.2 N.D. -2.3 -1.9 -1.2
in planta apoplastic; Pepper -2.3 N.D. -1.9 -1.9 -2.3
in planta apoplastic; Lima bean -3.0 N.D. -2.1 -1.9 -0.7
in planta apoplastic, chopping recovery; Green bean -1.7 N.D. -1.2 -1.5 -2.7
in planta apoplastic; Pepper -1.3 N.D. -1.8 -1.5 -2.3
in planta apoplastic, grinding recovery; Green bean -2.3 N.D. -1.3 -1.7 -1.3
in planta apoplastic; Green bean; 13 days -2.4 N.D. -1.7 -1.7 -0.7
in planta apoplastic; Pepper -1.4 N.D. -1.6 -1.4 -1.6
in planta apoplastic; Lima bean -1.0 N.D. -1.2 -1.6 -2.0
in planta apoplastic, sonication recovery; Green bean -1.3 N.D. -0.5 -1.4 -2.2
in planta apoplastic; Green bean; 6 days -1.6 N.D. -1.3 -1.0 -0.8
in planta apoplastic, sonication recovery; Green bean -0.8 N.D. -0.5 -1.7 -1.7
in planta apoplastic; Lima bean -0.7 N.D. -1.0 -1.2 -1.5
in planta apoplastic; Green bean; 6 days -1.6 N.D. -1.2 -0.8 -0.7
aphid library passed through aphids in food, 72 hours +0.1 N.D. -0.2 -0.5 -0.5
in planta epiphytic; Lima bean +0.1 N.D. -0.3 -0.3 -0.5
carbon source Succinic Acid (C) +0.1 N.D. -0.0 +0.2 -0.9
stress KB with Acridine orange 62.5 ug/ml -0.2 N.D. +0.2 -0.3 +0.6
stress KB with Levodopa 10 mM -0.2 N.D. +0.0 +0.4 +0.4
stress KB with Benzalkonium Chloride 6.25 ug/ml -0.0 N.D. +0.2 -0.2 +0.7
kb KB +0.3 N.D. -0.3 +0.2 +0.6
stress KB with Ferulic Acid 180 ug/ml +0.6 N.D. -0.1 +0.1 +0.2
stress KB with Mitomycin C 0.625 ug/ml +0.2 N.D. +0.4 -0.6 +1.1
stress KB with Biochanin a diacetate 10 mM +0.1 N.D. -0.0 +0.2 +0.8
stress KB with Paclitaxel 10 mM +0.2 N.D. +0.1 +0.3 +0.5
stress KB with Emodin 10 mM +0.2 N.D. +0.1 +0.4 +0.6
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