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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1008 and Psyr_1009 are separated by 92 nucleotides
Psyr_1009 and Psyr_1010 are separated by 131 nucleotides
Psyr_1010 and Psyr_1011 are separated by 157 nucleotides
Psyr_1011 and Psyr_1012 overlap by 32 nucleotides
Psyr_1008: Psyr_1008 - conserved hypothetical protein, at 1,143,499 to 1,143,726
_1008
Psyr_1009: Psyr_1009 - Peptidylprolyl isomerase, FKBP-type, at 1,143,819 to 1,144,304
_1009
Psyr_1010: Psyr_1010 - Glutathione peroxidase, at 1,144,436 to 1,144,924
_1010
Psyr_1011: Psyr_1011 - NADH:flavin oxidoreductase/NADH oxidase, at 1,145,082 to 1,146,185
_1011
Psyr_1012: Psyr_1012 - Glycosyl transferase, group 1, at 1,146,154 to 1,147,374
_1012
Group
Condition
Psyr
_1008
Psyr
_1009
Psyr
_1010
Psyr
_1011
Psyr
_1012
in planta
apoplastic; Green bean; 13 days
-2.3
-4.1
+0.4
-0.3
+0.2
aphid
library passed through aphids in food, 72 hours
-0.1
-1.5
-0.1
+0.0
-0.1
in planta
apoplastic, grinding recovery; Green bean
-0.1
-2.0
+0.0
+0.5
+0.1
carbon source
Sucrose (C)
-1.4
-0.2
-0.3
+0.0
+0.3
stress
KB with Quercetin 360 ug/ml
-0.6
-0.2
+0.1
-0.6
+0.1
in planta
epiphytic; Green bean
-0.6
+0.5
-0.4
-0.6
-0.1
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.3
+0.3
-0.4
-0.4
-0.2
stress
KB with Dimethyl Sulfoxide 1 vol%
+0.3
-0.8
+0.0
-0.5
+0.2
stress
KB with Ferulic Acid 180 ug/ml
-0.4
-0.9
+0.5
+0.1
+0.1
carbon source
a-Ketoglutaric (C)
+0.6
-0.8
-0.1
+0.0
-0.2
aphid
library passed through aphids in food, 72 hours
-0.6
-0.8
+0.3
+0.1
+0.6
in planta
apoplastic; Pepper
-0.7
-1.0
+0.8
+0.4
+0.2
in planta
apoplastic, grinding recovery; Green bean
+0.4
-0.8
+0.0
+0.3
+0.1
stress
KB with Esculin Monohydrate 10 mM
+0.6
-0.5
-0.0
+0.2
-0.2
stress
KB with 2',2'-Bisepigallocatechin Digallate 10 mM
+0.6
-0.5
-0.0
+0.3
-0.2
in planta
apoplastic; Green bean; 6 days
+0.3
-0.6
-0.2
+0.5
+0.2
stress
KB with Anisodamine Hydrobromide () 10 mM
+1.0
+0.1
-0.2
-0.6
+0.2
stress
KB with Mitomycin C 0.625 ug/ml
+0.8
+0.7
-1.1
+0.6
-0.3
carbon source
Fumaric (C)
+0.9
-0.5
-0.2
+0.2
+0.2
in planta
apoplastic, sonication recovery; Green bean
+1.4
-0.4
-0.2
+0.2
-0.4
in planta
apoplastic; Pepper
-0.6
-0.2
+1.0
+0.5
-0.0
in planta
epiphytic; Green bean
-0.1
+0.2
+0.6
-0.4
+0.4
in planta
apoplastic; Lima bean
+0.8
-0.7
+0.4
+0.2
+0.1
in planta
apoplastic; Lima bean
+0.8
-0.8
+0.4
+0.2
+0.2
in planta
apoplastic, sonication recovery; Green bean
+1.4
+0.1
-0.3
-0.1
+0.1
carbon source
4-Aminobutyric (C)
+1.1
-0.1
-0.1
+0.1
+0.3
stress
KB with Acridine orange 62.5 ug/ml
+0.5
+0.6
-0.4
+0.5
+0.1
in planta
apoplastic, chopping recovery; Green bean
+0.0
+0.7
+0.8
-0.1
+0.1
stress
KB with Lupeol 10 mM
+0.2
+1.0
+0.2
-0.1
+0.2
carbon source
L-Proline (C)
+1.2
+0.0
+0.1
+0.0
+0.3
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