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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_847 and PfGW456L13_848 overlap by 1 nucleotides
PfGW456L13_848 and PfGW456L13_849 are separated by 490 nucleotides
PfGW456L13_849 and PfGW456L13_850 are separated by 7 nucleotides
PfGW456L13_850 and PfGW456L13_851 are separated by 194 nucleotides
PfGW456L13_847 - hypothetical protein, at 953,628 to 953,906
_847
PfGW456L13_848 - Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly, at 953,906 to 954,238
_848
PfGW456L13_849 - Regulator of nucleoside diphosphate kinase, at 954,729 to 955,139
_849
PfGW456L13_850 - Adenylate cyclase (EC 4.6.1.1), at 955,147 to 957,990
_850
PfGW456L13_851 - DNA-binding protein inhibitor Id-2-related protein, at 958,185 to 958,430
_851
Group
Condition
PfGW456L13
_847
PfGW456L13
_848
PfGW456L13
_849
PfGW456L13
_850
PfGW456L13
_851
nitrogen source
nitrate (N)
+0.1
-0.7
-1.5
+0.0
N.D.
carbon source
L-Malic (C)
-0.4
-1.0
-0.4
+0.3
N.D.
carbon source
L-Tryptophan (C)
-1.2
+0.2
-0.5
+0.1
N.D.
carbon source
L-Arabinose (C)
+0.4
-0.5
-1.3
-0.0
N.D.
carbon source
succinate (C)
-0.2
-0.7
-0.4
-0.0
N.D.
nitrogen source
L-Histidine (N)
-0.0
-1.0
-0.3
+0.1
N.D.
nitrogen source
Uridine (N)
-0.3
-1.1
+0.1
+0.0
N.D.
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
+0.3
-0.3
-1.2
-0.1
N.D.
nitrogen source
Cytosine (N)
+0.2
-0.8
-0.4
-0.1
N.D.
carbon source
Trisodium citrate (C)
+0.2
-1.7
+0.5
-0.2
N.D.
carbon source
D-Lactate (C)
-0.7
-0.7
+0.4
-0.0
N.D.
nitrogen source
Ammonium chloride (N)
+0.3
-0.9
-0.5
+0.0
N.D.
carbon source
D-Gluconic Acid (C)
-0.6
+0.1
-0.6
+0.3
N.D.
nitrogen source
Glycine (N)
+0.5
-0.2
-0.8
+0.0
N.D.
carbon source
L-Lactate (C)
-0.0
-1.2
+0.7
+0.0
N.D.
nitrogen source
Gly-DL-Asp (N)
+0.4
-1.4
+0.5
-0.1
N.D.
carbon source
D-Galactose (C)
+0.2
-1.0
+0.2
+0.1
N.D.
carbon source
L-Malic (C)
+0.1
-1.0
+0.5
-0.0
N.D.
carbon source
L-Tryptophan (C)
+0.5
-0.1
-0.9
+0.1
N.D.
carbon source
D-Alanine (C)
+0.0
-0.9
+0.6
-0.0
N.D.
carbon source
a-Ketoglutaric (C)
+0.8
-1.0
-0.2
+0.1
N.D.
carbon source
L-Alanine (C)
-0.2
-0.6
+0.6
+0.1
N.D.
carbon source
octanoate (C)
-1.0
+2.0
-1.1
-0.0
N.D.
stress
Lomefloxacin 0.0004 mM
+0.3
+0.4
-0.6
-0.0
N.D.
carbon source
D-Serine (C)
-0.6
+0.5
+0.1
+0.1
N.D.
carbon source
D-Gluconic Acid (C)
+0.3
-0.5
+0.5
+0.1
N.D.
carbon source
D-Glucose (C)
-0.7
+0.2
+1.0
+0.2
N.D.
carbon source
a-Ketoglutaric (C)
+0.4
+0.7
-0.2
-0.1
N.D.
carbon source
Glycerol (C)
+0.2
-0.1
+1.1
+0.1
N.D.
stress
Cisplatin 0.0125 mg/ml
+0.4
+0.1
+0.9
+0.0
N.D.
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