Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 116 experiments or choose conditions or try the comparative fitness browser

500 ntPfGW456L13_5156 and PfGW456L13_5157 are separated by 81 nucleotidesPfGW456L13_5157 and PfGW456L13_2 are separated by 589 nucleotidesPfGW456L13_2 and PfGW456L13_3 are separated by 177 nucleotidesPfGW456L13_3 and PfGW456L13_4 are separated by 138 nucleotides PfGW456L13_5156 - tRNA-Ile-GAT, at 3,573 to 3,646 _5156 PfGW456L13_5157 - Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA, at 3,728 to 5,256 _5157 PfGW456L13_2 - Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27), at 5,846 to 7,339 _2 PfGW456L13_3 - Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18), at 7,517 to 8,866 _3 PfGW456L13_4 - LysR family transcriptional regulator PA0133, at 9,005 to 9,925 _4
Group Condition PfGW456L13_5156 PfGW456L13_5157 PfGW456L13_2 PfGW456L13_3 PfGW456L13_4
nitrogen source Uridine (N) N.D. N.D. -1.3 -2.7 -2.1
nitrogen source Cytosine (N) N.D. N.D. -0.7 -1.0 -0.8
carbon source octanoate (C) N.D. N.D. -1.1 -0.2 -1.0
carbon source L-Tryptophan (C) N.D. N.D. -0.5 -0.3 -0.0
carbon source D-Glucosamine Hydrochloride (C) N.D. N.D. -0.5 -0.0 +0.0
carbon source L-Tryptophan (C) N.D. N.D. -0.2 -0.2 -0.1
lb LB N.D. N.D. -0.2 -0.2 -0.1
stress Bacitracin 1 mg/ml N.D. N.D. -0.0 -0.1 -0.3
carbon source L-Valine (C) N.D. N.D. -0.3 -0.0 -0.1
carbon source L-Valine (C) N.D. N.D. -0.3 +0.0 -0.1
stress Lomefloxacin 0.0004 mM N.D. N.D. +0.1 -0.1 -0.3
carbon source D-Mannose (C) N.D. N.D. -0.2 -0.2 +0.1
carbon source L-Arabinose (C) N.D. N.D. +0.0 -0.4 +0.1
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x N.D. N.D. -0.1 -0.3 +0.2
carbon source L-Arabinose (C) N.D. N.D. +0.2 -0.2 -0.1
carbon source D-Gluconic Acid (C) N.D. N.D. -0.1 -0.2 +0.3
carbon source L-Lactate (C) N.D. N.D. +0.2 -0.1 -0.1
carbon source a-Ketoglutaric (C) N.D. N.D. +0.2 -0.2 +0.1
carbon source L-Histidine (C) N.D. N.D. -0.1 -0.0 +0.3
carbon source D-Glucose (C) N.D. N.D. +0.1 -0.1 +0.3
carbon source L-Glutamine (C) N.D. N.D. -0.1 +0.3 +0.1
carbon source D-Gluconic Acid (C) N.D. N.D. +0.1 -0.2 +0.4
carbon source D-Serine (C) N.D. N.D. -0.0 +0.1 +0.2
nitrogen source L-Glutamic (N) N.D. N.D. +0.2 -0.0 +0.1
nitrogen source L-Proline (N) N.D. N.D. +0.2 +0.1 +0.2
carbon source succinate (C) N.D. N.D. -0.1 +0.2 +0.3
carbon source Putrescine (C) N.D. N.D. +0.2 +0.2 +0.2
carbon source D-Lactate (C) N.D. N.D. +0.1 +0.3 +0.2
nitrogen source L-Valine (N) N.D. N.D. +0.1 +0.2 +0.3
carbon source L-Malic (C) N.D. N.D. +0.0 +0.2 +0.3
remove
PfGW456L13_5156
plot
remove
PfGW456L13_5157
plot
remove
PfGW456L13_2
remove
PfGW456L13_3
plot
remove
PfGW456L13_4
plot