Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_1038 and PfGW456L13_1039 overlap by 4 nucleotidesPfGW456L13_1039 and PfGW456L13_1040 are separated by 109 nucleotidesPfGW456L13_1040 and PfGW456L13_1041 are separated by 27 nucleotidesPfGW456L13_1041 and PfGW456L13_1042 are separated by 29 nucleotides PfGW456L13_1038 - COG1272: Predicted membrane protein hemolysin III homolog, at 1,151,175 to 1,151,792 _1038 PfGW456L13_1039 - Transcriptional regulator, LysR family, at 1,151,789 to 1,152,706 _1039 PfGW456L13_1040 - D-amino acid dehydrogenase small subunit (EC 1.4.99.1), at 1,152,816 to 1,154,057 _1040 PfGW456L13_1041 - Putative translation initiation inhibitor, yjgF family, at 1,154,085 to 1,154,435 _1041 PfGW456L13_1042 - Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4), at 1,154,465 to 1,155,367 _1042
Group Condition PfGW456L13_1038 PfGW456L13_1039 PfGW456L13_1040 PfGW456L13_1041 PfGW456L13_1042
carbon source succinate (C) -0.3 -0.7 -0.3 -1.7 -0.2
carbon source D-Galactose (C) +0.1 -0.1 -0.3 -2.8 -0.1
carbon source D-Glucosamine Hydrochloride (C) +0.1 -0.3 +0.1 -2.4 -0.2
stress Aluminum chloride 2.5 mM -0.2 -0.0 +0.2 -1.8 +0.0
carbon source Putrescine (C) +0.1 -0.8 -0.3 -0.2 -0.2
stress Paraquat dichloride 0.032 mg/ml -0.1 -0.3 -0.0 -0.8 -0.0
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x -0.4 +0.0 -0.1 -0.9 +0.1
carbon source Trisodium citrate (C) -0.2 +0.4 -0.3 -0.9 -0.1
stress Dimethyl Sulfoxide 7.5 vol% +0.0 -0.2 +0.1 -1.1 +0.0
carbon source L-Malic (C) -0.1 -0.7 -0.0 +0.4 -0.1
control LB +0.0 +0.5 +0.0 -0.9 -0.0
carbon source L-Glutamine (C) -0.2 -0.4 -0.3 +0.6 -0.2
carbon source octanoate (C) -0.2 -0.4 -0.4 +1.2 -0.2
carbon source D-Lactate (C) -0.3 +0.1 -0.2 +0.8 +0.1
carbon source Glycerol (C) -0.3 +0.3 -0.2 +0.8 +0.0
carbon source D,L-Lactate (C) +0.0 +0.1 -0.4 +1.1 -0.1
carbon source Tween 20 (C) +0.2 -0.2 +0.1 +0.7 -0.1
control LB control -0.0 +0.3 -0.1 +0.6 +0.1
carbon source a-Ketoglutaric (C) +0.2 +0.9 +0.0 +0.1 -0.2
carbon source L-Arabinose (C) +0.1 +0.8 +0.1 -0.2 +0.2
nitrogen source Gly-Glu (N) +0.0 +0.1 -0.2 +1.0 +0.1
carbon source L-Lactate (C) +0.4 -0.5 +0.1 +1.2 -0.1
carbon source L-Malic (C) +0.4 -0.0 +0.1 +1.0 -0.3
carbon source D-Fructose (C) +0.3 -0.2 -0.3 +1.3 +0.1
stress Fusidic 0.08 mg/ml -0.1 +0.3 +0.1 +0.8 +0.1
stress Aluminum chloride 5 mM +0.4 +0.3 +0.1 +0.5 +0.0
carbon source D-Fructose (C) +0.1 +0.8 -0.2 +0.8 -0.0
carbon source D-Galactose (C) -0.1 +0.5 +0.2 +1.1 +0.2
carbon source D-Serine (C) -0.1 -0.2 +1.1 +3.0 -0.1
carbon source D-Serine (C) +0.2 +0.0 +0.8 +2.6 +0.1
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