Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_6081 and Pf6N2E2_6082 are separated by 6 nucleotidesPf6N2E2_6082 and Pf6N2E2_6083 are separated by 168 nucleotidesPf6N2E2_6083 and Pf6N2E2_6171 are separated by 677 nucleotidesPf6N2E2_6171 and Pf6N2E2_6172 are separated by 122 nucleotides Pf6N2E2_6081 - Transcriptional regulator, TetR family, in cluster with 2-hydroxychromene-2-carboxylate isomerase family protein, glutathione-dependent, at 6,900,859 to 6,901,428 _6081 Pf6N2E2_6082 - Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1), at 6,901,435 to 6,901,716 _6082 Pf6N2E2_6083 - Threonine and homoserine efflux system, at 6,901,885 to 6,902,775 _6083 Pf6N2E2_6171 - Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA, at 6,903,453 to 6,904,981 _6171 Pf6N2E2_6172 - tRNA-Ile-GAT, at 6,905,104 to 6,905,177 _6172
Group Condition Pf6N2E2_6081 Pf6N2E2_6082 Pf6N2E2_6083 Pf6N2E2_6171 Pf6N2E2_6172
motility inner cut, LB soft agar motility assay -1.6 -3.7 +0.4 N.D. N.D.
carbon source D-Galactose (C) -0.5 -3.2 +0.1 N.D. N.D.
carbon source D-Galactose (C) -0.5 -3.0 +0.3 N.D. N.D.
nitrogen source nitrogen source Ammonium chloride 20mM -0.9 -2.3 -0.0 N.D. N.D.
stress Magnesium chloride 0.125 M -3.1 +0.1 +0.1 N.D. N.D.
nitrogen source nitrogen source nitrite 5mM -0.8 -1.8 -0.1 N.D. N.D.
stress dimethyl sulfone 0.25 M -1.2 -1.6 +0.1 N.D. N.D.
stress Vanillyl Alcohol 0.005 M -1.2 -1.2 +0.1 N.D. N.D.
stress deoxycholate 0.0125 M -0.6 -1.9 +0.3 N.D. N.D.
stress dimethyl sulfone 0.25 M +0.3 -2.6 +0.3 N.D. N.D.
nitrogen source nitrogen source nitrite 5mM -0.2 -1.8 +0.0 N.D. N.D.
stress antimonate 0.005 M -1.3 -0.6 -0.0 N.D. N.D.
nitrogen source nitrogen source nitrate 20mM -0.5 -1.3 -0.1 N.D. N.D.
motility outer cut, LB soft agar motility assay -0.6 -1.4 +0.2 N.D. N.D.
carbon source Ying_Others16 rep A; time point 3 -0.6 -1.0 -0.0 N.D. N.D.
carbon source Ying_AminoAcid20 rep C; time point 3 -0.4 -1.2 +0.0 N.D. N.D.
carbon source Ying_Nucleobase14 rep C; time point 3 -0.3 -1.2 -0.0 N.D. N.D.
nitrogen source nitrogen source nitrate 5mM -0.3 -1.1 -0.1 N.D. N.D.
vitamin With vitamins t2 -1.1 -0.2 -0.2 N.D. N.D.
nitrogen source nitrogen source nitrite 0.5mM -0.6 -0.7 -0.1 N.D. N.D.
carbon source Ying_Others16 rep B; time point 3 -0.3 -1.0 -0.1 N.D. N.D.
stress RCH2 defined with Zinc 0.016 mM -0.2 -1.2 -0.0 N.D. N.D.
motility inner cut, LB soft agar motility assay +0.1 -1.8 +0.3 N.D. N.D.
nitrogen source nitrogen source Ammonium chloride 20mM +0.3 -1.5 -0.0 N.D. N.D.
nitrogen source nitrogen source nitrate 5mM -0.4 -1.1 +0.3 N.D. N.D.
carbon source Ying_AminoAcid20 rep B; time point 2 +0.3 -1.3 -0.1 N.D. N.D.
nitrogen source nitrogen source nitrite 0.5mM +0.4 -1.3 -0.1 N.D. N.D.
carbon source Ying_OrganicAcid7 rep B; time point 2 +0.3 -1.1 -0.0 N.D. N.D.
stress Hydroxylamine 0.5 M +1.0 -0.3 -0.2 N.D. N.D.
stress bromate 0.05 M +1.0 +0.5 +0.1 N.D. N.D.
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