Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_4693 and Pf6N2E2_4694 are separated by 186 nucleotidesPf6N2E2_4694 and Pf6N2E2_4695 are separated by 189 nucleotidesPf6N2E2_4695 and Pf6N2E2_4696 are separated by 279 nucleotidesPf6N2E2_4696 and Pf6N2E2_4697 are separated by 87 nucleotides Pf6N2E2_4693 - ABC transporter for Carnitine Hydrochloride, periplasmic substrate-binding component (from data), at 5,426,068 to 5,427,012 _4693 Pf6N2E2_4694 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 5,427,199 to 5,428,143 _4694 Pf6N2E2_4695 - putative secreted protein, at 5,428,333 to 5,429,502 _4695 Pf6N2E2_4696 - FIG00953108: hypothetical protein, at 5,429,782 to 5,430,198 _4696 Pf6N2E2_4697 - hypothetical protein, at 5,430,286 to 5,431,062 _4697
Group Condition Pf6N2E2_4693 Pf6N2E2_4694 Pf6N2E2_4695 Pf6N2E2_4696 Pf6N2E2_4697
carbon source Carnitine Hydrochloride (C) -3.1 -6.6 -0.2 +0.1 +0.1
carbon source Carnitine Hydrochloride (C) -3.7 -5.1 -0.2 +0.0 +0.2
stress bromate 0.05 M -0.6 -0.5 -0.1 -0.8 +0.0
stress Hydroxylamine 0.5 M -0.7 -0.1 -0.0 -0.8 +0.1
nitrogen source L-Aspartic Acid (N) -0.1 -0.9 +0.0 +0.0 -0.4
stress Bile salts 0.0125 M +0.1 +0.5 -0.3 -1.4 -0.2
carbon source Ying_all64 rep C; time point 3 -0.2 +0.3 -0.0 -1.1 +0.0
carbon source Ying_all64 rep B; time point 3 +0.1 +0.3 -0.2 -1.1 -0.1
stress antimonate 0.005 M +0.2 -0.4 -0.1 -0.6 -0.2
nitrogen source nitrogen source nitrate 20mM -0.2 -0.9 +0.1 +0.2 -0.1
carbon source Ying_AminoAcid20 rep A; time point 3 +0.2 +0.3 -0.2 -1.2 -0.1
carbon source Ying_Nucleobase14 rep B; time point 1 +0.1 -0.1 +0.2 -0.9 -0.1
motility inner cut, LB soft agar motility assay -0.4 -0.9 +0.2 +0.5 -0.2
carbon source Ying_OrganicAcid7 rep A; time point 3 +0.2 +0.2 -0.2 -0.9 +0.1
stress deoxycholate 0.0125 M -0.4 -0.3 -0.2 +0.2 +0.3
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.4 +0.3 -0.2 -0.8 -0.0
carbon source Ying_sugar7 rep B; time point 1 +0.0 +0.3 +0.3 -0.5 -0.4
stress DEANONOate 0.000625 M -0.6 +0.4 +0.3 -0.5 +0.2
nitrogen source nitrogen source nitrate 5mM +0.3 -0.9 +0.1 +0.3 -0.1
stress Cadmium chloride hemipentahydrate 0.00005 M +0.4 -0.1 -0.2 -0.6 +0.2
carbon source Ying_Others16 rep C; time point 2 +0.3 +0.2 +0.3 -0.8 +0.0
carbon source Ying_Others16 rep B; time point 3 +0.1 +0.7 -0.1 -0.5 +0.1
lb LB no stress 48 hours +0.4 +0.5 +0.0 -0.5 -0.1
stress Aluminum chloride 4 mM -0.4 +0.4 -0.0 +0.6 +0.2
stress Zinc chloride 0.0000015625 M +0.5 -0.3 +0.3 +0.2 +0.1
carbon source Ying_sugar7 rep C; time point 1 +0.2 +0.1 +0.0 +0.9 -0.3
carbon source Ying_Nucleobase14 rep C; time point 2 +0.3 +0.3 +0.2 +0.6 -0.3
carbon source Ying_Others16 rep A; time point 3 -0.2 +0.5 -0.0 +0.7 +0.2
carbon source Ying_Others16 rep A; time point 2 +0.2 +0.5 +0.3 +0.4 -0.1
nitrogen source nitrogen source nitrate 20mM +0.3 +0.4 -0.1 +0.6 +0.2
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