Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Pf6N2E2_4178	Pf6N2E2_4179	Pf6N2E2_4180	Pf6N2E2_4181	Pf6N2E2_4182
motility	inner cut, LB soft agar motility assay	-0.4	-0.3	+0.7	-4.9	-0.0
motility	inner cut, LB soft agar motility assay	-0.4	-0.7	+0.6	-4.6	+0.2
stress	deoxycholate 0.0125 M	+0.1	+0.2	-0.5	-4.1	-0.2
stress	Bile salts 0.0125 M	-0.0	-0.1	+0.2	-4.2	-0.2
stress	periodate 0.00125 M	-0.0	-0.2	-0.1	-3.7	+0.2
denitrifying	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate C	+0.0	+0.0	-0.0	-2.9	-0.2
stress	PTLB purified from Pseudomonas sp. FW300-N2E2 0.05 x	+0.0	-0.0	-0.3	-2.4	-0.0
denitrifying	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate C	-0.2	+0.2	-0.1	-2.7	+0.1
stress	Doxycycline hyclate 0.0001 mg/ml	-0.2	-0.0	-0.1	-2.1	+0.1
stress	Hydroxide 0.05 M	-0.4	-0.3	-0.1	-1.4	-0.1
stress	molybdate 0.25 M	-0.1	-0.1	+0.0	-2.4	+0.4
carbon source	Ying_AminoAcid20 rep B; time point 2	-0.1	+0.0	-0.2	-1.3	-0.6
lb	LB	-0.1	+0.1	-0.1	-1.9	-0.2
carbon source	Ying_Nucleobase14 rep A; time point 2	+0.2	-0.0	+0.0	-1.2	-0.8
carbon source	Ying_AminoAcid20 rep A; time point 2	-0.3	+0.3	+0.2	-1.3	-0.6
motility	outer cut, LB soft agar motility assay	-0.3	-0.7	+0.5	-1.6	+0.4
lb	LB no stress 48 hours	-0.3	+0.2	-0.3	-1.4	+0.2
carbon source	Ying_sugar7 rep B; time point 1	-0.2	+0.2	+0.3	-1.1	-0.7
motility	inner cut, LB soft agar motility assay	-0.1	-0.6	+0.5	-1.0	+0.4
vitamin	No vitamins t2	-0.2	-0.3	-0.4	+1.5	-0.6
motility	outer cut, LB soft agar motility assay	-0.8	-0.6	+0.3	+1.0	+0.6
vitamin	With vitamins t1	-0.1	-0.0	-0.2	+1.4	-0.5
stress	Zinc chloride 0.0000015625 M	-0.1	-0.1	-0.1	+1.6	-0.8
nitrogen source	L-Serine (N)	-0.3	-0.3	+0.1	+1.2	+0.2
nitrogen source	Cytidine (N)	-0.0	-0.1	+0.1	+1.6	-0.5
carbon source	Ying_AminoAcid20 rep A; time point 3	-0.2	+0.1	-0.1	+1.5	-0.2
carbon source	Ying_Nucleobase14 rep A; time point 3	-0.3	+0.0	+0.1	+1.5	-0.2
stress	Hydroxylamine 0.5 M	-0.6	-0.0	+0.0	+1.8	+0.1
stress	Chloride 600 mM	-0.2	-0.2	-0.0	+1.6	+0.2
nitrogen source	Glycine (N)	+0.1	-0.1	-0.1	+2.1	-0.0