Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_2545 and Pf6N2E2_2546 overlap by 12 nucleotidesPf6N2E2_2546 and Pf6N2E2_2547 are separated by 151 nucleotidesPf6N2E2_2547 and Pf6N2E2_2548 are separated by 12 nucleotidesPf6N2E2_2548 and Pf6N2E2_2549 are separated by 232 nucleotides Pf6N2E2_2545 - FIG00953242: hypothetical protein, at 3,007,539 to 3,007,766 _2545 Pf6N2E2_2546 - Carbon storage regulator, at 3,007,755 to 3,007,955 _2546 Pf6N2E2_2547 - Protein of unknown function UPF0060, at 3,008,107 to 3,008,484 _2547 Pf6N2E2_2548 - Oxidoreductase, short chain dehydrogenase/reductase family, at 3,008,497 to 3,009,312 _2548 Pf6N2E2_2549 - hypothetical protein, at 3,009,545 to 3,009,697 _2549
Group Condition Pf6N2E2_2545 Pf6N2E2_2546 Pf6N2E2_2547 Pf6N2E2_2548 Pf6N2E2_2549
stress RCH2 defined with Thallium(I) acetate 0.002 mg/ml N.D. -2.1 -4.4 -0.0 -0.2
stress Hydroxylamine 0.5 M N.D. -1.4 -0.2 -0.1 -2.5
nitrogen source nitrogen source nitrate 5mM N.D. -1.0 +0.0 -0.2 -2.0
carbon source Carbon source Sucrose 5 mM N.D. -1.1 -0.3 -0.0 -1.7
carbon source Ying_Nucleobase14 rep B; time point 1 N.D. -0.4 -0.2 -0.7 -1.6
nitrogen source nitrogen source nitrate 20mM N.D. -0.5 +0.2 -0.0 -2.2
stress Phosphomycin 0.004 mg/ml N.D. -0.3 -0.2 -0.5 -1.4
nitrogen source nitrogen source Ammonium chloride 20mM N.D. -0.4 -0.2 +0.1 -1.9
stress Cobalt chloride 0.4 mM N.D. +0.0 -0.2 -0.2 -1.9
stress Hydroxide 0.05 M N.D. -0.3 -0.2 -0.0 -1.8
carbon source D-Lactate (C) N.D. +0.2 +0.0 -0.1 -2.3
stress Nickel (II) chloride 1.5 mM N.D. +0.1 -0.2 -0.1 -2.0
carbon source Ying_Nucleobase14 rep B; time point 3 N.D. +0.5 -0.2 -0.8 -1.6
stress Zinc chloride 0.0000015625 M N.D. -0.3 -0.1 +0.2 -1.8
stress Cobalt chloride 0.4 mM N.D. +0.2 -0.2 +0.1 -2.1
stress molybdate 0.25 M N.D. -1.5 -0.5 -0.1 +0.2
nitrogen source L-Aspartic Acid (N) N.D. +0.3 -0.0 +0.2 -2.3
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate C N.D. -0.8 +0.1 +0.1 -1.2
stress RCH2 defined with Cobalt chloride 0.04 mM N.D. +0.3 -0.1 -0.2 -1.7
lb LB no stress 48 hours N.D. +0.3 +0.0 -0.0 -1.9
lb LB no stress 48 hours N.D. +0.5 +0.2 -0.2 -2.0
stress 4-Hydroxyacetophenone 0.00025 M N.D. +0.4 +0.0 -0.0 -1.7
carbon source L-Arabinose (C) N.D. +0.3 +0.2 -0.1 -1.6
stress Vanillyl Alcohol 0.005 M N.D. +0.1 +0.3 +0.2 -1.8
carbon source D-Trehalose (C) N.D. +0.7 +0.1 -0.1 -1.8
carbon source Carbon source Sucrose 2.5 mM N.D. +0.8 -0.1 +0.0 -1.8
carbon source Ying_AminoAcid20 rep A; time point 3 N.D. +0.4 +0.2 -0.8 -1.0
stress Cobalt chloride 0.6 mM N.D. +0.7 -0.5 -0.3 -0.7
lb LB no stress 24 hours N.D. -1.2 +0.2 +0.2 +0.5
carbon source Ying_AminoAcid20 rep B; time point 2 N.D. +0.1 +0.0 -0.6 +1.7
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