Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS01840 and PFLU_RS01845 are separated by 185 nucleotidesPFLU_RS01845 and PFLU_RS01850 are separated by 220 nucleotidesPFLU_RS01850 and PFLU_RS01855 are separated by 37 nucleotidesPFLU_RS01855 and PFLU_RS01860 overlap by 8 nucleotides PFLU_RS01840: PFLU_RS01840 - glucans biosynthesis glucosyltransferase MdoH, at 414,404 to 416,974 _RS01840 PFLU_RS01845: PFLU_RS01845 - transporter substrate-binding domain-containing protein, at 417,160 to 417,960 _RS01845 PFLU_RS01850: PFLU_RS01850 - transporter substrate-binding domain-containing protein, at 418,181 to 418,978 _RS01850 PFLU_RS01855: PFLU_RS01855 - amino acid ABC transporter permease, at 419,016 to 419,975 _RS01855 PFLU_RS01860: PFLU_RS01860 - amino acid ABC transporter ATP-binding protein, at 419,968 to 420,702 _RS01860
Group Condition PFLU_RS01840 PFLU_RS01845 PFLU_RS01850 PFLU_RS01855 PFLU_RS01860
stress Sucrose (C) and Ammonium chloride (N); with MOPS; with PEG -3.0 +0.0 -0.1 +0.0 -0.0
stress Sucrose (C) and Ammonium chloride (N); with MOPS; with PEG -3.1 +0.2 +0.1 -0.1 -0.1
temperature shift Temperature shift 30_to_34 -2.5 +0.1 +0.4 +0.5 +0.3
temperature shift Temperature shift 30_to_34 -2.6 -0.1 +0.7 +0.5 +0.7
carbon and nitrogen source NAG carbon and (N) -2.0 +0.2 +0.7 +0.4 +0.2
carbon and nitrogen source NAG carbon and (N) -1.8 -0.4 +0.5 +0.6 +0.8
carbon source NAG (C) -1.2 +0.6 +0.5 +0.3 +0.6
pH Growth at pH9 and (C) Trisodium citrate -0.9 -0.1 +0.8 +0.9 +0.8
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +2.8 -0.1 +0.0 +0.0 -0.7
carbon source L-Isoleucine (C) +0.0 -0.3 +1.2 +1.1 +0.7
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.2 -0.1 +1.0 +1.0 +1.2
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +1.6 -0.2 +0.4 +0.3 +0.8
carbon source Xanthosine (C) -0.5 +0.3 +0.9 +0.9 +1.5
carbon source L-Isoleucine (C) +0.0 -0.2 +1.3 +1.1 +0.9
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.2 -0.1 +1.1 +1.0 +1.4
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +1.5 -0.4 +0.7 +0.7 +0.8
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.0 -0.2 +1.2 +0.9 +1.6
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.9 +0.2 +0.7 +0.3 +1.3
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +2.0 +0.2 +0.2 +0.2 +0.9
stress Betaine (C)(N); with TAPS; with chloride +0.9 +0.8 +0.6 +0.0 +1.1
carbon source L-Isoleucine (C) +0.3 -0.4 +1.3 +1.0 +1.4
carbon source L-Valine (C) +0.0 +0.5 +0.9 +0.9 +1.3
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +1.9 +0.3 +0.0 +0.4 +1.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +1.6 -0.3 +0.8 +1.0 +0.9
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +1.6 +0.0 +0.8 +0.8 +1.0
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +1.7 +0.2 +1.0 +1.0 +1.3
carbon source p-Coumaric (C) 5 mM +5.3 +0.2 +0.3 +0.1 -0.5
carbon source p-Coumaric (C) 5 mM +4.9 +0.3 +0.1 -0.1 +0.4
carbon source p-Coumaric (C) 5 mM +5.2 -0.1 +0.3 +0.0 +0.1
carbon source p-Coumaric (C) 5 mM +4.9 -0.1 +0.2 -0.0 +0.6
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