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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
pepP and cysK are separated by 194 nucleotides
cysK and yurZ are separated by 1 nucleotides
yurZ and OKGIIK_08185 are separated by 30 nucleotides
OKGIIK_08185 and lipA are separated by 59 nucleotides
OKGIIK_08170: pepP - Xaa-Pro aminopeptidase, at 1,795,612 to 1,797,411
pepP
OKGIIK_08175: cysK - pyridoxal-5-phosphate-dependent protein subunit beta, at 1,797,606 to 1,798,556
cysK
OKGIIK_08180: yurZ - alkylhydroperoxidase, at 1,798,558 to 1,798,908
yurZ
OKGIIK_08185: OKGIIK_08185 - hypothetical protein, at 1,798,939 to 1,799,154
_08185
OKGIIK_08190: lipA - lipoyl synthase, at 1,799,214 to 1,800,218
lipA
Group
Condition
OKGIIK
_08170
OKGIIK
_08175
OKGIIK
_08180
OKGIIK
_08185
OKGIIK
_08190
pepP
cysK
yurZ
lipA
no stress control
no stress control
-0.3
-0.1
-0.8
N.D.
+0.0
pH
R2A_PIPES pH 4
-0.2
+0.1
-0.4
N.D.
-0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
-0.0
-0.3
N.D.
+0.0
no stress control
no stress control
-0.0
-0.1
-0.2
N.D.
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.3
+0.1
-0.1
N.D.
-0.0
no stress control
no stress control
-0.2
-0.1
+0.0
N.D.
+0.1
stress
R2A_PIPES with Cadmium chloride 128 uM
+0.3
-0.2
-0.2
N.D.
+0.0
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.0
-0.0
-0.0
N.D.
+0.0
no stress control
no stress control
+0.3
+0.0
-0.1
N.D.
-0.1
pH
R2A_PIPES pH 4.25
-0.0
-0.1
+0.3
N.D.
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
+0.1
+0.4
N.D.
-0.1
pH
R2A_PIPES pH 4.25
-0.1
+0.1
+0.2
N.D.
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.2
+0.2
+0.2
N.D.
+0.0
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.0
-0.0
+0.5
N.D.
-0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.3
+0.3
+0.3
N.D.
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.1
+0.3
N.D.
+0.2
no stress control
no stress control
-0.1
-0.0
+0.4
N.D.
+0.1
pH
R2A_PIPES pH 4
-0.1
+0.1
+0.5
N.D.
-0.2
no stress control
no stress control
-0.0
-0.2
+0.4
N.D.
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.0
+0.1
+0.4
N.D.
-0.1
no stress control
no stress control
-0.0
+0.1
+0.3
N.D.
-0.0
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.0
-0.1
+0.3
N.D.
+0.1
pH
R2A_PIPES pH 4.5
+0.2
+0.3
-0.1
N.D.
+0.1
no stress control
no stress control
-0.3
+0.1
+0.6
N.D.
+0.1
pH
R2A_PIPES pH 4.5
+0.2
+0.2
+0.3
N.D.
+0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.0
-0.0
+0.7
N.D.
+0.0
stress
R2A_PIPES with Nickel (II) chloride 424 uM
+0.0
-0.0
+0.6
N.D.
+0.2
no stress control
no stress control
-0.1
+0.2
+0.6
N.D.
+0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.2
+0.0
+0.6
N.D.
-0.0
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.1
+0.3
+1.0
N.D.
-0.2
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