Fitness for 5 genes in Escherichia coli ECOR27

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500 ntgpsA and cysE are separated by 79 nucleotidescysE and trmL are separated by 52 nucleotidestrmL and lldD are separated by 185 nucleotideslldD and lldR overlap by 4 nucleotides NOLOHH_07635: gpsA - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase, at 1,453,243 to 1,454,262 gpsA NOLOHH_07640: cysE - serine O-acetyltransferase, at 1,454,342 to 1,455,163 cysE NOLOHH_07645: trmL - tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL, at 1,455,216 to 1,455,689 trmL NOLOHH_07650: lldD - quinone-dependent L-lactate dehydrogenase, at 1,455,875 to 1,457,065 lldD NOLOHH_07655: lldR - transcriptional regulator LldR, at 1,457,062 to 1,457,838 lldR
Group Condition NOLOHH_07635 NOLOHH_07640 NOLOHH_07645 NOLOHH_07650 NOLOHH_07655
gpsA cysE trmL lldD lldR
carbon source L-Rhamnose N.D. -5.6 -0.1 -1.3 -0.8
carbon source Casamino-acids N.D. -5.4 -0.1 +0.1 -0.3
carbon source Sodium-DL-Lactate N.D. -3.0 -0.0 -0.5 -2.1
carbon source L-Arabinose N.D. -5.3 +0.3 +0.2 -0.1
phage Bas67 N.D. -3.3 -0.1 +0.1 -0.0
carbon source Sodium-DL-Lactate N.D. -1.1 -0.1 -0.4 -1.5
carbon source L-Rhamnose N.D. -1.4 +0.3 -1.4 -0.7
phage Bas31 N.D. -2.7 -0.5 -0.2 +0.4
phage JK16 N.D. -2.3 +0.0 +0.0 -0.2
phage Bas31 N.D. -2.0 -0.2 -0.3 -0.0
no phage control Control_ECOR27 N.D. -2.3 -0.0 +0.0 -0.2
phage Bas69 N.D. -1.9 -0.0 -0.2 -0.1
carbon source D-Glucose N.D. -1.6 -0.1 -0.2 -0.1
no phage control Control_ECOR27 N.D. -2.0 -0.1 +0.1 +0.0
phage Bas10 N.D. -1.7 +0.1 +0.1 -0.1
phage K5 N.D. -1.0 -0.2 +0.0 +0.0
phage Bas45 N.D. -0.7 -0.1 -0.1 -0.2
phage K5 N.D. -1.1 +0.0 +0.2 -0.1
phage Bas38 N.D. -0.8 -0.1 +0.0 -0.1
phage TP15 N.D. -0.7 -0.0 -0.1 -0.1
carbon source Casamino-acids N.D. -0.9 -0.0 +0.1 -0.1
carbon source D-Glucose N.D. -0.5 -0.1 -0.1 -0.1
carbon source L-Arabinose N.D. -1.2 +0.4 +0.2 -0.1
phage TP2 N.D. +0.7 -0.2 -0.4 +0.0
phage Bas07 N.D. +0.5 -0.0 -0.1 -0.2
phage K25 N.D. +0.6 -0.2 +0.1 -0.1
phage Bas45 N.D. +0.6 -0.1 +0.1 -0.1
phage RB68 N.D. +0.5 +0.2 +0.0 -0.2
phage Bas37 N.D. +0.5 +0.1 +0.1 -0.1
phage RB68 N.D. +0.9 -0.2 +0.0 -0.1
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