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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05929 and MPMX19_05930 overlap by 105 nucleotides
MPMX19_05930 and MPMX19_05931 are separated by 238 nucleotides
MPMX19_05931 and MPMX19_05932 are separated by 728 nucleotides
MPMX19_05932 and MPMX19_05933 are separated by 119 nucleotides
MPMX19_05929: MPMX19_05929 - Siroheme synthase, at 67,861 to 68,862
_05929
MPMX19_05930: MPMX19_05930 - Dipeptidyl-peptidase 6, at 68,758 to 69,546
_05930
MPMX19_05931: MPMX19_05931 - Lysine 6-dehydrogenase, at 69,785 to 70,864
_05931
MPMX19_05932: MPMX19_05932 - Bifunctional protein PutA, at 71,593 to 75,351
_05932
MPMX19_05933: MPMX19_05933 - hypothetical protein, at 75,471 to 76,337
_05933
Group
Condition
MPMX19
_05929
MPMX19
_05930
MPMX19
_05931
MPMX19
_05932
MPMX19
_05933
nl-ccm_agar
NL-CCM_agar
+0.0
-1.0
-0.5
+0.0
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.3
-1.3
-0.4
+0.1
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
-0.7
-0.1
+0.0
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.0
-0.5
-0.3
-0.1
N.D.
nl-ccm
NL-CCM, start OD=0.3
+0.1
-0.8
-0.2
+0.0
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
-0.4
-0.4
-0.0
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
-1.1
+0.1
+0.1
N.D.
nl-ccm_agar
NL-CCM_agar
+0.0
-0.4
-0.4
+0.0
N.D.
nl-ccm
NL-CCM, start OD=0.1
+0.1
-0.6
-0.2
+0.1
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
-0.6
-0.0
-0.1
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
-0.6
-0.2
+0.0
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.4
-0.8
-0.2
+0.0
N.D.
mgl
MGL
+0.2
+0.2
-0.8
-0.1
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.3
-0.3
-0.4
+0.0
N.D.
mgl
MGL
+0.1
-0.1
-0.6
+0.2
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
+0.4
-0.6
-0.1
N.D.
nf
NF
+0.2
-0.1
-0.4
+0.1
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
+0.2
-0.5
-0.0
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.2
+0.4
-0.5
-0.1
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.3
+0.2
-0.3
-0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
+0.2
-0.5
+0.0
N.D.
mgl
MGL
+0.6
-0.3
-0.3
-0.1
N.D.
mgl
MGL
+0.3
+0.4
-0.6
-0.1
N.D.
nf
NF
+0.2
+0.1
-0.4
+0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
+0.5
-0.4
-0.1
N.D.
nl-ccm_agar
NL-CCM_agar
-0.0
+0.4
-0.4
+0.0
N.D.
nln
NLN
+0.2
+0.2
-0.2
+0.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.6
+0.1
-0.2
N.D.
nf_with_fulln
NF_with_fullN
+0.4
+0.2
-0.1
+0.1
N.D.
nf
NF
+0.3
+0.5
-0.2
+0.1
N.D.
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