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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05743 and MPMX19_05744 are separated by 17 nucleotides
MPMX19_05744 and MPMX19_05745 are separated by 196 nucleotides
MPMX19_05745 and MPMX19_05746 overlap by 1 nucleotides
MPMX19_05746 and MPMX19_05747 are separated by 147 nucleotides
MPMX19_05743: MPMX19_05743 - Anti-sigma-E factor ChrR, at 459,597 to 460,325
_05743
MPMX19_05744: MPMX19_05744 - hypothetical protein, at 460,343 to 462,427
_05744
MPMX19_05745: MPMX19_05745 - Sensor histidine kinase RcsC, at 462,624 to 466,052
_05745
MPMX19_05746: MPMX19_05746 - hypothetical protein, at 466,052 to 467,893
_05746
MPMX19_05747: MPMX19_05747 - Transcriptional regulatory protein DegU, at 468,041 to 468,763
_05747
Group
Condition
MPMX19
_05743
MPMX19
_05744
MPMX19
_05745
MPMX19
_05746
MPMX19
_05747
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
-0.2
-0.2
-0.3
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
-0.1
-0.3
-0.0
-0.7
nf_with_fulln
NF_with_fullN
-0.0
+0.1
-0.2
-0.0
-0.8
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
-0.1
+0.0
-0.3
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.7
-0.0
-0.2
-0.4
+0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
+0.1
+0.3
-0.2
-1.1
nln
NLN
-0.1
+0.1
-0.0
-0.0
-0.8
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
-0.1
+0.4
-0.2
-0.6
mgl
MGL
-0.7
+0.2
+0.2
+0.3
-0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
-0.2
+0.4
-0.2
-0.5
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
-0.0
-0.4
-0.2
+0.4
nl-ccm_agar
NL-CCM_agar
+0.0
+0.1
+0.5
-0.5
-0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.0
+0.1
+0.1
+0.2
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.3
+0.2
+0.2
-0.2
-0.5
nl-ccm_agar
NL-CCM_agar
-0.2
+0.1
+0.5
+0.0
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
+0.3
+0.1
-0.1
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
+0.1
+0.4
-0.1
-0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.3
+0.1
+0.4
-0.2
+0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
+0.1
+0.5
-0.3
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
+0.2
+0.1
+0.2
+0.2
nl-ccm_agar
NL-CCM_agar
+0.1
+0.0
+0.6
-0.1
-0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.2
+0.5
-0.3
-0.1
nf_with_fulln
NF_with_fullN
+0.2
+0.1
-0.0
+0.4
-0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
+0.1
+0.5
-0.3
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.0
-0.0
+0.4
+0.4
-0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
+0.1
+0.5
-0.5
+0.3
nl-ccm_agar
NL-CCM_agar
-0.1
-0.0
+0.5
-0.1
+0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
+0.3
+0.2
+0.2
-0.3
mgl
MGL
-0.1
+0.3
+0.0
+0.2
+0.6
mgl
MGL
-0.0
+0.1
+0.2
+0.4
+0.9
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