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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04682 and MPMX19_04683 overlap by 4 nucleotides
MPMX19_04683 and MPMX19_04684 overlap by 4 nucleotides
MPMX19_04684 and MPMX19_04685 are separated by 21 nucleotides
MPMX19_04685 and MPMX19_04686 are separated by 37 nucleotides
MPMX19_04682: MPMX19_04682 - hypothetical protein, at 67,411 to 68,607
_04682
MPMX19_04683: MPMX19_04683 - Acylamidase, at 68,604 to 70,010
_04683
MPMX19_04684: MPMX19_04684 - HTH-type transcriptional repressor RspR, at 70,007 to 70,744
_04684
MPMX19_04685: MPMX19_04685 - D-hydantoinase, at 70,766 to 72,202
_04685
MPMX19_04686: MPMX19_04686 - Maleate isomerase, at 72,240 to 72,986
_04686
Group
Condition
MPMX19
_04682
MPMX19
_04683
MPMX19
_04684
MPMX19
_04685
MPMX19
_04686
nf_with10percent_fulln
NF_with10percent_fullN
-1.1
-0.2
-0.4
+0.0
-0.8
nf_with_fulln
NF_with_fullN
-1.8
+0.0
-0.2
-0.0
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-1.1
-0.3
-0.1
+0.1
-0.1
nf
NF
-0.7
-0.6
-0.3
+0.1
+0.1
mgl
MGL
-0.8
-0.6
+0.4
+0.1
+0.1
mgl
MGL
-0.3
-0.4
-0.2
-0.1
+0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.7
-0.3
-0.0
+0.1
+0.3
nf_with_fulln
NF_with_fullN
-0.4
-0.4
+0.1
+0.1
+0.1
mgl
MGL
+0.1
-0.9
+0.2
-0.0
+0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.6
-0.3
+0.2
+0.0
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-1.0
+0.6
+0.1
+0.1
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.8
-0.3
+0.2
+0.1
+0.6
mgl
MGL
+0.3
-0.6
+0.1
+0.1
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.7
-0.8
+0.0
-0.3
nln
NLN
-0.6
+0.5
+0.0
+0.2
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.5
-0.6
-0.1
+0.1
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
+0.2
-0.4
+0.2
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.8
-0.6
+0.1
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.7
-0.6
+0.2
+0.0
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.5
-0.3
+0.0
-0.0
+0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.6
-0.3
-0.1
+0.1
+0.2
nl-ccm_agar
NL-CCM_agar
+0.7
-0.5
-0.2
+0.1
+0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.5
+0.3
-0.3
+0.0
+0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.5
-0.2
+0.3
+0.1
+0.0
nl-ccm
NL-CCM, start OD=0.1
+0.8
+0.1
-0.3
-0.1
+0.5
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.7
-0.3
+0.3
-0.0
+0.4
nl-ccm
NL-CCM, start OD=0.3
+0.9
-0.1
+0.3
-0.3
+0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.7
+0.3
+0.1
+0.0
+0.2
mgl
MGL
+0.7
+0.2
+0.1
+0.2
+0.3
nl-ccm_agar
NL-CCM_agar
+1.1
-0.3
+0.2
+0.2
+0.3
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