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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04588 and MPMX19_04589 overlap by 56 nucleotides
MPMX19_04589 and MPMX19_04590 are separated by 370 nucleotides
MPMX19_04590 and MPMX19_04591 are separated by 8 nucleotides
MPMX19_04591 and MPMX19_04592 are separated by 35 nucleotides
MPMX19_04588: MPMX19_04588 - Sensor histidine kinase RcsC, at 967,808 to 971,281
_04588
MPMX19_04589: MPMX19_04589 - Protein-glutamate methylesterase/protein-glutamine glutaminase, at 971,226 to 972,200
_04589
MPMX19_04590: MPMX19_04590 - Nitrate import ATP-binding protein NrtD, at 972,571 to 973,404
_04590
MPMX19_04591: MPMX19_04591 - hypothetical protein, at 973,413 to 974,300
_04591
MPMX19_04592: MPMX19_04592 - hypothetical protein, at 974,336 to 975,370
_04592
Group
Condition
MPMX19
_04588
MPMX19
_04589
MPMX19
_04590
MPMX19
_04591
MPMX19
_04592
mgl
MGL
-0.1
-0.2
-0.3
-0.9
-0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
-0.2
-0.1
+0.0
-0.2
mgl
MGL
-0.1
-0.4
+0.1
-0.1
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
+0.1
-0.1
-0.3
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.0
+0.1
-0.4
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
+0.1
-0.1
-0.3
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
-0.2
+0.2
-0.0
-0.0
mgl
MGL
+0.0
+0.1
+0.2
-0.4
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
-0.3
+0.0
+0.3
-0.1
mgl
MGL
-0.0
-0.3
+0.3
-0.0
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
-0.1
-0.1
+0.2
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
-0.3
+0.2
+0.2
+0.1
nln
NLN
+0.1
+0.1
-0.1
+0.1
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
+0.2
+0.0
+0.3
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
+0.2
-0.1
+0.3
-0.1
nf
NF
+0.0
-0.1
+0.1
+0.4
+0.1
nln
NLN
-0.1
+0.1
+0.2
+0.2
+0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.1
+0.2
+0.2
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.1
+0.4
+0.1
-0.1
nf_with_fulln
NF_with_fullN
+0.1
+0.0
+0.1
+0.2
+0.2
nl-ccm
NL-CCM, start OD=0.3
+0.0
+0.4
+0.2
-0.0
-0.0
nf_with_fulln
NF_with_fullN
+0.0
+0.1
+0.1
+0.4
+0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.0
+0.3
+0.1
+0.1
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.1
+0.0
+0.3
+0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.0
+0.1
+0.3
+0.3
+0.1
nf_with_fulln
NF_with_fullN
+0.0
+0.1
+0.2
+0.4
+0.0
nf_with_fulln
NF_with_fullN
+0.1
+0.1
+0.1
+0.5
+0.0
nf_with_fulln
NF_with_fullN
+0.1
+0.1
+0.1
+0.5
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.0
+0.1
+0.5
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.2
+0.4
+0.3
+0.2
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