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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_04513 and MPMX19_04514 overlap by 4 nucleotides
MPMX19_04514 and MPMX19_04515 are separated by 100 nucleotides
MPMX19_04515 and MPMX19_04516 overlap by 4 nucleotides
MPMX19_04516 and MPMX19_04517 are separated by 70 nucleotides
MPMX19_04513: MPMX19_04513 - Adaptive-response sensory-kinase SasA, at 883,773 to 886,277
_04513
MPMX19_04514: MPMX19_04514 - hypothetical protein, at 886,274 to 887,701
_04514
MPMX19_04515: MPMX19_04515 - hypothetical protein, at 887,802 to 888,302
_04515
MPMX19_04516: MPMX19_04516 - Long-chain-fatty-acid--CoA ligase, at 888,299 to 889,819
_04516
MPMX19_04517: MPMX19_04517 - Glycine cleavage system transcriptional activator, at 889,890 to 890,936
_04517
Group
Condition
MPMX19
_04513
MPMX19
_04514
MPMX19
_04515
MPMX19
_04516
MPMX19
_04517
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.2
+0.3
-0.6
-0.0
mgl
MGL
+0.0
-0.1
-0.7
+0.1
+0.0
nl-ccm
NL-CCM, start OD=0.1
-0.3
+0.2
-0.1
+0.0
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
-0.0
-0.2
-0.0
-0.3
nf
NF
-0.5
+0.0
+0.3
+0.1
+0.1
mgl
MGL
+0.2
-0.2
-0.3
+0.1
+0.2
mgl
MGL
-0.3
-0.1
-0.2
+0.1
+0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
+0.1
-0.1
+0.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.7
-0.3
-0.1
-0.3
+0.1
nl-ccm
NL-CCM, start OD=0.3
+0.6
-0.3
-0.1
-0.1
+0.2
nl-ccm
NL-CCM, start OD=0.1
-0.2
+0.2
+0.1
+0.1
+0.2
nl-ccm_agar
NL-CCM_agar
-0.3
+0.2
+0.2
+0.2
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
+0.3
+0.2
+0.1
-0.0
nln
NLN
+0.3
+0.1
-0.0
-0.1
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
+0.2
+0.1
+0.1
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.3
+0.1
+0.2
+0.3
+0.3
nln
NLN
+0.5
+0.1
-0.0
-0.1
+0.2
nln
NLN
+0.4
+0.1
+0.0
-0.2
+0.3
nf_with_fulln
NF_with_fullN
+0.4
+0.2
-0.1
-0.1
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.0
-0.1
+0.3
+0.2
+0.3
nf_with_fulln
NF_with_fullN
+0.6
+0.1
+0.1
-0.0
-0.0
nf_with_fulln
NF_with_fullN
+0.6
+0.2
-0.1
-0.0
+0.1
nl-ccm_agar
NL-CCM_agar
+0.3
+0.1
+0.2
+0.1
+0.0
nl-ccm
NL-CCM, start OD=0.3
+0.5
+0.2
-0.1
-0.1
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.4
+0.0
+0.0
+0.0
+0.3
nl-ccm
NL-CCM, start OD=0.1
+0.3
+0.0
+0.2
+0.0
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
+0.2
+0.0
+0.2
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
+0.2
+0.3
+0.1
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.8
+0.1
-0.0
+0.1
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.4
+0.3
+0.2
+0.3
+0.1
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