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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03621 and MPMX19_03622 are separated by 256 nucleotides
MPMX19_03622 and MPMX19_03623 overlap by 53 nucleotides
MPMX19_03623 and MPMX19_03624 are separated by 24 nucleotides
MPMX19_03624 and MPMX19_03625 are separated by 101 nucleotides
MPMX19_03621: MPMX19_03621 - N-acetylglucosamine repressor, at 1,054,844 to 1,056,073
_03621
MPMX19_03622: MPMX19_03622 - Ribose import ATP-binding protein RbsA, at 1,056,330 to 1,057,844
_03622
MPMX19_03623: MPMX19_03623 - Ribose import permease protein RbsC, at 1,057,792 to 1,058,829
_03623
MPMX19_03624: MPMX19_03624 - Ribose import binding protein RbsB, at 1,058,854 to 1,059,846
_03624
MPMX19_03625: MPMX19_03625 - Inosose dehydratase, at 1,059,948 to 1,061,015
_03625
Group
Condition
MPMX19
_03621
MPMX19
_03622
MPMX19
_03623
MPMX19
_03624
MPMX19
_03625
mgl
MGL
-0.6
-0.5
+0.4
-0.1
+0.1
mgl
MGL
-0.6
-0.3
+0.1
+0.0
+0.0
nf_with_fulln
NF_with_fullN
-0.5
+0.3
-0.0
-0.1
-0.2
nl-ccm_agar
NL-CCM_agar
-0.1
-0.2
+0.1
-0.2
-0.1
nln
NLN
-0.5
-0.0
+0.0
+0.1
-0.0
mgl
MGL
+0.0
-0.4
+0.1
-0.1
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
-0.2
+0.2
-0.2
-0.0
nf_with_fulln
NF_with_fullN
+0.0
+0.2
+0.0
-0.1
-0.3
mgl
MGL
+0.1
-0.3
-0.1
+0.1
+0.1
nl-ccm
NL-CCM, start OD=0.1
-0.2
+0.2
+0.1
-0.3
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.0
-0.4
+0.0
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
-0.0
+0.2
-0.4
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
-0.1
+0.2
-0.2
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.3
+0.0
-0.0
-0.3
-0.0
mgl
MGL
-0.3
+0.2
+0.2
-0.4
+0.3
nf
NF
+0.1
+0.0
+0.2
-0.2
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
+0.0
+0.2
-0.3
+0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
-0.1
+0.3
-0.2
+0.1
nl-ccm_agar
NL-CCM_agar
+0.2
-0.2
+0.2
-0.0
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
+0.1
+0.1
-0.0
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
-0.0
-0.1
+0.1
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.1
+0.3
-0.2
+0.2
nl-ccm_agar
NL-CCM_agar
+0.4
-0.1
+0.0
-0.1
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.7
-0.4
+0.0
+0.2
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.4
-0.0
+0.2
-0.1
-0.0
nf
NF
+0.1
+0.1
+0.4
-0.2
+0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.2
+0.2
-0.0
+0.0
nl-ccm
NL-CCM, start OD=0.3
+0.3
-0.0
+0.3
-0.0
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.7
-0.0
+0.5
+0.2
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+1.1
+0.2
+0.1
-0.1
+0.2
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