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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03496 and MPMX19_03497 are separated by 252 nucleotides
MPMX19_03497 and MPMX19_03498 are separated by 4 nucleotides
MPMX19_03498 and MPMX19_03499 overlap by 4 nucleotides
MPMX19_03499 and MPMX19_03500 are separated by 16 nucleotides
MPMX19_03496: MPMX19_03496 - Protein FdhE, at 912,973 to 913,887
_03496
MPMX19_03497: MPMX19_03497 - Formate dehydrogenase-O major subunit, at 914,140 to 917,202
_03497
MPMX19_03498: MPMX19_03498 - Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit, at 917,207 to 918,118
_03498
MPMX19_03499: MPMX19_03499 - Formate dehydrogenase, cytochrome b556(fdo) subunit, at 918,115 to 918,774
_03499
MPMX19_03500: MPMX19_03500 - Sulfur carrier protein FdhD, at 918,791 to 919,627
_03500
Group
Condition
MPMX19
_03496
MPMX19
_03497
MPMX19
_03498
MPMX19
_03499
MPMX19
_03500
nl-ccm
NL-CCM, start OD=0.3
-0.5
-0.1
+0.1
-1.6
-0.1
mgl
MGL
-0.3
+0.1
+0.0
-1.4
-0.6
mgl
MGL
-1.0
+0.1
+0.1
-0.8
-0.5
nf
NF
-0.0
-0.1
-0.0
-1.1
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.5
-0.1
+0.1
-0.3
-0.6
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.5
-0.2
+0.2
-0.6
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.8
-0.1
+0.0
-0.4
-0.1
mgl
MGL
-1.2
+0.2
-0.2
+0.8
-1.1
nl-ccm_agar
NL-CCM_agar
-0.5
-0.2
-0.1
-0.4
+0.1
nln
NLN
+0.1
-0.1
-0.1
-1.4
+0.3
nf
NF
+0.2
-0.1
-0.1
-0.3
-0.9
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
-0.1
+0.0
-0.8
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.9
-0.0
+0.0
-0.3
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
-0.0
-0.0
-1.2
+0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
-0.0
-0.0
-0.7
-0.5
mgl
MGL
+0.1
-0.1
-0.4
-0.2
-0.4
nln
NLN
+0.4
-0.1
-0.1
-1.1
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
-0.0
-0.2
-0.6
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.4
+0.0
-0.1
-0.5
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.3
-0.0
+0.1
-0.6
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
+0.0
+0.0
-0.8
+0.2
nln
NLN
-0.0
-0.0
+0.0
-0.7
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.5
+0.0
-0.1
+0.2
+0.3
nf_with_fulln
NF_with_fullN
+0.4
+0.1
+0.0
-1.0
+0.2
nl-ccm
NL-CCM, start OD=0.3
-0.4
-0.1
+0.1
-0.3
+0.5
nl-ccm
NL-CCM, start OD=0.1
-0.5
+0.0
+0.1
+0.4
-0.1
nf_with_fulln
NF_with_fullN
+0.3
-0.2
-0.2
-0.5
+0.6
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.5
+0.0
+0.1
-0.6
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.6
-0.1
-0.0
-0.4
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.9
+0.1
-0.0
-0.2
-0.3
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