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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_03395 and MPMX19_03396 are separated by 5 nucleotides
MPMX19_03396 and MPMX19_03397 are separated by 33 nucleotides
MPMX19_03397 and MPMX19_03398 are separated by 43 nucleotides
MPMX19_03398 and MPMX19_03399 are separated by 30 nucleotides
MPMX19_03395: MPMX19_03395 - Lipopolysaccharide export system ATP-binding protein LptB, at 781,340 to 782,113
_03395
MPMX19_03396: MPMX19_03396 - High-affinity branched-chain amino acid transport ATP-binding protein LivF, at 782,119 to 782,826
_03396
MPMX19_03397: MPMX19_03397 - Acetylornithine deacetylase, at 782,860 to 784,023
_03397
MPMX19_03398: MPMX19_03398 - 5'-deoxyadenosine deaminase, at 784,067 to 785,464
_03398
MPMX19_03399: MPMX19_03399 - Guanidinopropionase, at 785,495 to 786,454
_03399
Group
Condition
MPMX19
_03395
MPMX19
_03396
MPMX19
_03397
MPMX19
_03398
MPMX19
_03399
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.7
-0.0
-0.1
-0.2
nl-ccm
NL-CCM, start OD=0.3
N.D.
-0.6
-0.2
-0.1
-0.0
nf_with_fulln
NF_with_fullN
N.D.
-0.7
-0.1
+0.2
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.9
+0.2
-0.1
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.4
-0.1
+0.2
-0.3
mgl
MGL
N.D.
+0.5
-0.9
-0.0
+0.1
mgl
MGL
N.D.
-0.5
+0.2
+0.1
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.2
+0.2
-0.0
-0.4
nln
NLN
N.D.
+0.1
-0.2
+0.1
-0.3
nf
NF
N.D.
-0.5
+0.1
+0.1
+0.1
mgl
MGL
N.D.
+0.5
-0.2
-0.1
-0.2
nf_with_fulln
NF_with_fullN
N.D.
-0.3
+0.3
+0.4
-0.2
mgl
MGL
N.D.
-0.1
-0.1
-0.1
+0.5
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
+0.4
-0.3
+0.2
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.4
-0.1
+0.1
-0.2
nf_with_fulln
NF_with_fullN
N.D.
+0.4
-0.2
+0.2
-0.2
nln
NLN
N.D.
+0.5
-0.2
+0.2
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
+0.6
-0.1
+0.0
-0.1
nf_with_fulln
NF_with_fullN
N.D.
+0.4
+0.0
+0.2
-0.1
nln
NLN
N.D.
+0.4
+0.1
+0.1
-0.2
nln
NLN
N.D.
+0.5
+0.1
+0.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
+0.3
-0.1
+0.3
+0.1
nl-ccm
NL-CCM, start OD=0.1
N.D.
+0.5
+0.0
-0.1
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
+0.4
+0.1
+0.2
-0.0
nf
NF
N.D.
+0.5
+0.1
-0.0
+0.2
mgl
MGL
N.D.
+0.7
+0.2
-0.5
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
+0.4
+0.0
+0.1
+0.2
nf_with_fulln
NF_with_fullN
N.D.
+0.5
+0.2
+0.3
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
+0.4
+0.3
+0.0
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
+0.3
+0.3
+0.2
+0.1
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