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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02334 and MPMX19_02335 are separated by 830 nucleotides
MPMX19_02335 and MPMX19_02336 overlap by 4 nucleotides
MPMX19_02336 and MPMX19_02337 are separated by 226 nucleotides
MPMX19_02337 and MPMX19_02338 are separated by 181 nucleotides
MPMX19_02334: MPMX19_02334 - hypothetical protein, at 2,458,290 to 2,458,835
_02334
MPMX19_02335: MPMX19_02335 - hypothetical protein, at 2,459,666 to 2,460,178
_02335
MPMX19_02336: MPMX19_02336 - hypothetical protein, at 2,460,175 to 2,462,010
_02336
MPMX19_02337: MPMX19_02337 - Nopaline-binding periplasmic protein, at 2,462,237 to 2,463,082
_02337
MPMX19_02338: MPMX19_02338 - hypothetical protein, at 2,463,264 to 2,463,641
_02338
Group
Condition
MPMX19
_02334
MPMX19
_02335
MPMX19
_02336
MPMX19
_02337
MPMX19
_02338
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.4
-0.2
+0.1
-0.1
-0.1
nl-ccm
NL-CCM, start OD=0.3
-1.0
+0.2
+0.0
+0.2
-0.1
mgl
MGL
-0.7
-0.5
+0.4
+0.1
+0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.8
+0.1
+0.1
+0.0
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.5
-0.1
+0.1
+0.0
-0.2
nl-ccm_agar
NL-CCM_agar
-0.5
-0.2
+0.2
-0.2
+0.1
nln
NLN
-0.6
+0.1
+0.0
-0.2
+0.1
nl-ccm_agar
NL-CCM_agar
-0.4
-0.2
+0.1
-0.2
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.4
+0.2
+0.1
-0.3
-0.0
nl-ccm
NL-CCM, start OD=0.1
-0.5
-0.1
+0.0
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.5
-0.1
+0.0
+0.2
+0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.6
+0.1
+0.1
+0.0
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.5
+0.1
-0.1
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.4
+0.2
+0.1
+0.2
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.3
+0.3
-0.1
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
+0.0
+0.2
+0.2
-0.3
mgl
MGL
-1.0
+0.3
+0.2
+0.4
+0.1
mgl
MGL
-0.0
-0.4
+0.2
-0.0
+0.4
nln
NLN
-0.4
+0.1
+0.0
+0.2
+0.3
mgl
MGL
+0.2
-0.2
+0.2
-0.2
+0.1
nl-ccm_agar
NL-CCM_agar
-0.3
+0.2
+0.1
+0.2
+0.0
nf_with_fulln
NF_with_fullN
+0.2
+0.2
-0.3
+0.3
+0.2
nf_with_fulln
NF_with_fullN
+0.4
-0.0
-0.3
+0.4
+0.0
nln
NLN
+0.3
-0.2
+0.1
+0.3
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
-0.1
+0.2
+0.3
+0.3
nf_with_fulln
NF_with_fullN
+0.5
+0.2
-0.2
+0.1
+0.1
nf_with_fulln
NF_with_fullN
+0.4
+0.0
-0.2
+0.5
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
-0.1
+0.2
+0.2
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
-0.3
+0.2
+0.3
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.6
+0.2
+0.2
-0.2
+0.1
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