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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01903 and MPMX19_01904 are separated by 829 nucleotides
MPMX19_01904 and MPMX19_01905 are separated by 161 nucleotides
MPMX19_01905 and MPMX19_01906 are separated by 184 nucleotides
MPMX19_01906 and MPMX19_01907 are separated by 58 nucleotides
MPMX19_01903: MPMX19_01903 - 4-carboxy-4-hydroxy-2-oxoadipate aldolase, at 1,989,072 to 1,989,740
_01903
MPMX19_01904: MPMX19_01904 - tRNA-Gly, at 1,990,570 to 1,990,644
_01904
MPMX19_01905: MPMX19_01905 - Prolyl-tRNA editing protein ProX, at 1,990,806 to 1,991,366
_01905
MPMX19_01906: MPMX19_01906 - Chaperedoxin, at 1,991,551 to 1,992,516
_01906
MPMX19_01907: MPMX19_01907 - hypothetical protein, at 1,992,575 to 1,993,243
_01907
Group
Condition
MPMX19
_01903
MPMX19
_01904
MPMX19
_01905
MPMX19
_01906
MPMX19
_01907
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
-0.1
+0.1
-0.5
nln
NLN
N.D.
N.D.
+0.1
-0.4
-0.0
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.4
-0.0
+0.1
mgl
MGL
N.D.
N.D.
-0.5
+0.2
+0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
-0.2
-0.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
+0.2
-0.4
-0.0
mgl
MGL
N.D.
N.D.
-0.1
-0.2
+0.2
nl-ccm
NL-CCM, start OD=0.3
N.D.
N.D.
-0.0
-0.4
+0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.1
-0.2
+0.3
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.3
+0.0
+0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
-0.2
-0.1
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
+0.1
-0.3
+0.1
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.3
-0.1
+0.3
nln
NLN
N.D.
N.D.
-0.0
-0.3
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
-0.1
+0.4
-0.3
nf
NF
N.D.
N.D.
+0.0
-0.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
-0.3
+0.2
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
+0.0
-0.2
+0.2
mgl
MGL
N.D.
N.D.
-0.2
-0.0
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.1
-0.2
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.1
+0.0
+0.3
nln
NLN
N.D.
N.D.
+0.0
-0.1
+0.3
mgl
MGL
N.D.
N.D.
+0.5
-0.4
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.1
-0.2
+0.2
mgl
MGL
N.D.
N.D.
+0.4
-0.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.4
-0.2
+0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
+0.3
+0.1
+0.0
nl-ccm
NL-CCM, start OD=0.1
N.D.
N.D.
+0.1
+0.1
+0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.3
-0.1
+0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
+0.4
+0.1
+0.3
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