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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00243 and MPMX19_00244 overlap by 4 nucleotides
MPMX19_00244 and MPMX19_00245 are separated by 76 nucleotides
MPMX19_00245 and MPMX19_00246 are separated by 99 nucleotides
MPMX19_00246 and MPMX19_00247 are separated by 198 nucleotides
MPMX19_00243: MPMX19_00243 - ECF RNA polymerase sigma factor SigJ, at 244,502 to 245,407
_00243
MPMX19_00244: MPMX19_00244 - hypothetical protein, at 245,404 to 245,778
_00244
MPMX19_00245: MPMX19_00245 - hypothetical protein, at 245,855 to 246,589
_00245
MPMX19_00246: MPMX19_00246 - hypothetical protein, at 246,689 to 247,054
_00246
MPMX19_00247: MPMX19_00247 - Ferric uptake regulation protein, at 247,253 to 247,690
_00247
Group
Condition
MPMX19
_00243
MPMX19
_00244
MPMX19
_00245
MPMX19
_00246
MPMX19
_00247
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.3
+0.4
N.D.
N.D.
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.1
N.D.
N.D.
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.4
N.D.
N.D.
-0.4
nln
NLN
+0.2
-0.5
N.D.
N.D.
+0.2
mgl
MGL
-0.3
+0.5
N.D.
N.D.
+0.1
mgl
MGL
+0.2
+0.4
N.D.
N.D.
-0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
+0.6
N.D.
N.D.
-0.2
nl-ccm_agar
NL-CCM_agar
+0.1
+0.5
N.D.
N.D.
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
+0.4
N.D.
N.D.
+0.3
nl-ccm_agar
NL-CCM_agar
-0.1
+0.7
N.D.
N.D.
+0.0
nl-ccm
NL-CCM, start OD=0.3
+0.1
+0.6
N.D.
N.D.
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.0
+0.7
N.D.
N.D.
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
+0.4
N.D.
N.D.
+0.2
nl-ccm_agar
NL-CCM_agar
-0.1
+0.5
N.D.
N.D.
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
+0.5
N.D.
N.D.
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.0
+0.3
N.D.
N.D.
+0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
+0.5
N.D.
N.D.
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
+0.4
N.D.
N.D.
+0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.5
N.D.
N.D.
+0.1
mgl
MGL
+0.2
+0.1
N.D.
N.D.
+0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
+0.3
N.D.
N.D.
+0.4
nl-ccm_agar
NL-CCM_agar
+0.2
+0.3
N.D.
N.D.
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
+0.5
N.D.
N.D.
+0.0
nl-ccm
NL-CCM, start OD=0.1
+0.2
+0.5
N.D.
N.D.
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
+0.2
N.D.
N.D.
+0.4
nl-ccm
NL-CCM, start OD=0.3
+0.1
+0.5
N.D.
N.D.
+0.2
mgl
MGL
-0.0
+0.4
N.D.
N.D.
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.6
N.D.
N.D.
+0.4
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
+0.6
N.D.
N.D.
+0.1
nf_with_fulln
NF_with_fullN
+0.1
+0.4
N.D.
N.D.
+0.4
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