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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_00083 and MPMX19_00084 are separated by 12 nucleotides
MPMX19_00084 and MPMX19_00085 are separated by 373 nucleotides
MPMX19_00085 and MPMX19_00086 are separated by 60 nucleotides
MPMX19_00086 and MPMX19_00087 are separated by 62 nucleotides
MPMX19_00083: MPMX19_00083 - Phenylalanine--tRNA ligase alpha subunit, at 87,960 to 89,027
_00083
MPMX19_00084: MPMX19_00084 - Phenylalanine--tRNA ligase beta subunit, at 89,040 to 91,451
_00084
MPMX19_00085: MPMX19_00085 - hypothetical protein, at 91,825 to 92,238
_00085
MPMX19_00086: MPMX19_00086 - 3'3'-cGAMP-specific phosphodiesterase 2, at 92,299 to 94,113
_00086
MPMX19_00087: MPMX19_00087 - hypothetical protein, at 94,176 to 95,123
_00087
Group
Condition
MPMX19
_00083
MPMX19
_00084
MPMX19
_00085
MPMX19
_00086
MPMX19
_00087
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
-0.7
-0.1
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
-0.3
+0.1
-0.4
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.5
+0.0
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
-0.4
-0.0
-0.0
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.7
+0.2
+0.1
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.4
+0.1
-0.0
mgl
MGL
N.D.
N.D.
+0.1
-0.2
-0.2
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.4
+0.1
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.3
-0.2
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
+0.3
-0.1
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
+0.3
+0.0
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
+0.4
-0.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.4
-0.1
-0.1
nl-ccm
NL-CCM, start OD=0.1
N.D.
N.D.
+0.4
-0.1
-0.0
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
+0.2
-0.1
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
+0.3
-0.1
+0.0
nl-ccm
NL-CCM, start OD=0.3
N.D.
N.D.
+0.3
-0.1
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.3
-0.1
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
+0.4
-0.1
+0.1
nf
NF
N.D.
N.D.
+0.4
-0.1
+0.1
nf_with_fulln
NF_with_fullN
N.D.
N.D.
+0.4
+0.1
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
+0.4
-0.1
+0.0
nl-ccm
NL-CCM, start OD=0.1
N.D.
N.D.
+0.3
-0.0
+0.1
nln
NLN
N.D.
N.D.
+0.3
-0.0
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
+0.3
-0.0
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.4
+0.0
+0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
+0.7
-0.1
-0.0
nln
NLN
N.D.
N.D.
+0.5
+0.0
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
+0.6
-0.0
+0.1
mgl
MGL
N.D.
N.D.
+0.9
+0.1
-0.2
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