Fitness for 5 genes in Methanococcus maripaludis S2

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	MMP_RS05555	MMP_RS05560	MMP_RS05565	MMP_RS05570	MMP_RS05575
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations	-6.1	-0.7	N.D.	N.D.	-0.1
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 10 generations	-5.8	-0.3	N.D.	N.D.	+0.2
nutrient t2	H2 deepwell autotrophic conditions	-5.4	-0.4	N.D.	N.D.	+0.0
nutrient t2	H2 deepwell acetate FREE	-4.8	-0.8	N.D.	N.D.	-0.1
stress	McCas_H2_complete sodium bromide 250 mM	-5.1	-0.5	N.D.	N.D.	-0.2
rich t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE	-4.7	-1.1	N.D.	N.D.	+0.2
nutrient t1	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE	-5.2	-0.4	N.D.	N.D.	+0.1
stress	H2 McCas with 1 hour oxygen exposure	-4.5	-0.8	N.D.	N.D.	-0.1
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations	-5.6	+0.2	N.D.	N.D.	-0.0
nutrient t2	H2 deepwell acetate and vitamin FREE	-4.8	-0.6	N.D.	N.D.	+0.0
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations	-4.4	-0.9	N.D.	N.D.	-0.1
nutrient t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE	-4.9	-0.3	N.D.	N.D.	-0.0
stress	McCas_H2_complete Econazole nitrate salt 0.02 mM	-6.2	+0.6	N.D.	N.D.	+0.4
nutrient t2	Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE	-5.0	-0.0	N.D.	N.D.	-0.0
nutrient t1	Formate deepwell casamino FREE	-5.2	+0.2	N.D.	N.D.	-0.0
nutrient t2	H2 deepwell casamino FREE	-4.9	-0.3	N.D.	N.D.	+0.2
nutrient t2	H2 deepwell vitamin and casamino FREE	-4.8	-0.1	N.D.	N.D.	-0.1
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations	-5.3	+0.3	N.D.	N.D.	+0.1
stress	H2 McCas with 1 mM polysulfide	-3.6	-1.1	N.D.	N.D.	-0.1
stress	H2 McCas with 40 minute oxygen exposure	-4.0	-0.6	N.D.	N.D.	-0.0
nutrient t1	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE	-4.3	-0.5	N.D.	N.D.	+0.1
nutrient t2	H2 deepwell vitamin and casamino FREE	-4.7	-0.2	N.D.	N.D.	+0.2
nutrient t2	H2 deepwell acetate and casamino FREE	-4.8	+0.2	N.D.	N.D.	+0.0
rich t2	H2 McCas, 5g/L bicarb, 40 psi H2CO2	-4.2	-0.4	N.D.	N.D.	+0.1
stress	McCas_formate_complete Chloride 250 mM	-4.5	-0.2	N.D.	N.D.	+0.2
nutrient t2	H2 deepwell autotrophic conditions	-4.8	+0.5	N.D.	N.D.	-0.1
nutrient t2	H2 deepwell acetate and casamino FREE	-4.3	-0.3	N.D.	N.D.	+0.2
nutrient t2	H2 deepwell acetate and vitamin FREE	-4.0	-0.5	N.D.	N.D.	+0.3
rich t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2	-3.3	-1.2	N.D.	N.D.	+0.3
nitrogen source	H2 N-free with 10mM L-Alanine	+3.8	-0.9	N.D.	N.D.	+0.2